RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TSACCQ96A04 125 aaPredicted RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 RFT1Q96AA3 541 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 RBM18Q96H35 190 aaKnown RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 VPS39Q96JC1 886 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 SGK494Q96LW2 274 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 TSSK2Q96PF2 358 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 CTAGE1Q96RT6 745 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 NDNQ99608 321 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 TEX13BQ9BXU2 312 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 MIS12Q9H081 205 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ZMYND12Q9H0C1 365 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 RIMS4Q9H426 269 aaPredicted RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 TLE6Q9H808 572 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 RPF1Q9H9Y2 349 aaKnown RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 PELI2Q9HAT8 420 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 POT1Q9NUX5 634 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ZNF701Q9NV72 531 aaPredicted RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 SPHK1Q9NYA1 384 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 DONSONQ9NYP3 566 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 DNPEPQ9ULA0 475 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 MYO6Q9UM54 1294 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 RABL2BQ9UNT1 228 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 KCNJ14Q9UNX9 436 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ZNF510Q9Y2H8 683 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 IKBKGQ9Y6K9 419 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 COX11Q9Y6N1 276 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 PFASO15067 1338 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 MACROD2A1Z1Q3 448 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 C4orf47A7E2U8 309 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 E5RGE8 158 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 SLC28A2O43868 658 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 GMNNO75496 209 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 OR6B1O95007 311 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 DIRAS3O95661 229 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 PMS2P2O95744 297 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 GAS8O95995 478 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 NUDT17P0C025 328 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 KRT5P13647 590 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 GOT1P17174 413 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 ELAVL4P26378 380 aaKnown RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 ALDH1B1P30837 517 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 CASQ1P31415 396 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 AKT2P31751 481 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 ANP32AP39687 249 aaKnown RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 ASMTP46597 345 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 PITPNBP48739 271 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 CNN1P51911 297 aaKnown RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 FKBP1BP68106 108 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 MBTD1Q05BQ5 628 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 KLC1Q07866 573 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 ABRQ12979 859 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 TSTA3Q13630 321 aaPredicted RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 KLF9Q13886 244 aaPredicted RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 GK2Q14410 553 aaPredicted RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 HLFQ16534 295 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 FASTKD1Q53R41 847 aaKnown RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 ASPRV1Q53RT3 343 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 STXBP5Q5T5C0 1151 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 RAET1GQ6H3X3 334 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 KLHL10Q6JEL2 608 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 FUT10Q6P4F1 479 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 CTR9Q6PD62 1173 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 PSRC1Q6PGN9 363 aaPredicted RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 DLEU7Q6UYE1 221 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 PPP1R42Q7Z4L9 355 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 GPR141Q7Z602 305 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 TAF8Q7Z7C8 310 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 MRPL10Q7Z7H8 261 aaKnown RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 RTN4RL2Q86UN3 420 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 PIM3Q86V86 326 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 SATL1Q86VE3 508 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 KMT5CQ86Y97 462 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 SAMD14Q8IZD0 417 aaPredicted RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 THEM5Q8N1Q8 247 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 FBXW8Q8N3Y1 598 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 FAM216AQ8WUB2 273 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 TMED6Q8WW62 240 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 CDCA5Q96FF9 252 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 ABHD8Q96I13 439 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 ASCL2Q99929 193 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 URM1Q9BTM9 101 aaKnown RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 SF3B5Q9BWJ5 86 aaKnown RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 PANK2Q9BZ23 570 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 RAB17Q9H0T7 212 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 TMEM245Q9H330 911 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 UBQLN3Q9H347 655 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 ACTL8Q9H568 366 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 SLC35D1Q9NTN3 355 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 SLC38A7Q9NVC3 462 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 HIF1ANQ9NWT6 349 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 WNT16Q9UBV4 365 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 RALYQ9UKM9 306 aaKnown RBP2.91□□□□□ -1.94
TRAV28-201ENST00000557548 STUB1Q9UNE7 303 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 PLA2G4CQ9UP65 541 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 VDAC3Q9Y277 283 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 PLEKHA6Q9Y2H5 1048 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 NSG2Q9Y328 171 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 TMED7Q9Y3B3 224 aa2.91□□□□□ -1.94
TRAV28-201ENST00000557548 IGLV5-37A0A075B6J1 123 aa2.9□□□□□ -1.95
TRAV28-201ENST00000557548 TRAV18A0A075B6X5 111 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms