RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 PELI2Q9HAT8 420 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 SAR1AQ9NR31 198 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 EVA1BQ9NVM1 165 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 ZFP69BQ9UJL9 534 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 PCDHGA5Q9Y5G8 931 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 FAM221BA6H8Z2 402 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 CCT8L1PA6NM43 557 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 SLC28A1O00337 649 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 LSM1O15116 133 aaKnown RBP9.8□□□□□ -0.84
SRP54-208ENST00000555557 UBDO15205 165 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 RGS14O43566 566 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 OR1F1O43749 312 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 DFNA5O60443 496 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 TGFB1P01137 390 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 STATHP02808 62 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 LBPP18428 481 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 ATXN3P54252 364 aaPredicted RBP9.8□□□□□ -0.84
SRP54-208ENST00000555557 DIO3P55073 304 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 RPS13P62277 151 aaKnown RBP9.8□□□□□ -0.84
SRP54-208ENST00000555557 ABATP80404 500 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 COL9A2Q14055 689 aaPredicted RBP9.8□□□□□ -0.84
SRP54-208ENST00000555557 AP5B1Q2VPB7 878 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 ATP6AP1LQ52LC2 224 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 RFTN2Q52LD8 501 aaPredicted RBP9.8□□□□□ -0.84
SRP54-208ENST00000555557 PLA2G2CQ5R387 149 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 C6orf136Q5SQH8 315 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 ZCCHC8Q6NZY4 707 aaKnown RBP9.8□□□□□ -0.84
SRP54-208ENST00000555557 SPESP1Q6UW49 350 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 WDR87Q6ZQQ6 2873 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 VN1R5Q7Z5H4 357 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 CLNKQ7Z7G1 428 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.8□□□□□ -0.84
SRP54-208ENST00000555557 LAS2Q8IYD9 372 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 KRT78Q8N1N4 520 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 AVL9Q8NBF6 648 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 PRSS33Q8NF86 280 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 OR4C6Q8NH72 309 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 SLC45A3Q96JT2 553 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 APOLD1Q96LR9 279 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 C1orf50Q9BV19 199 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 DUSP23Q9BVJ7 150 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.8□□□□□ -0.84
SRP54-208ENST00000555557 SYNPO2LQ9H987 977 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 RIC8BQ9NVN3 520 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 PADI4Q9UM07 663 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 SLC12A4Q9UP95 1085 aa9.8□□□□□ -0.84
SRP54-208ENST00000555557 LY6G6EA0A0G2JKS1 128 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 LNP1A1A4G5 178 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 LILRA5A6NI73 299 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 SAP18O00422 153 aaKnown RBP9.79□□□□□ -0.84
SRP54-208ENST00000555557 NUDT21O43809 227 aaKnown RBP9.79□□□□□ -0.84
SRP54-208ENST00000555557 CCDC22O60826 627 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 SEC22BO75396 215 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 CCNDBP1O95273 360 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 PROS1P07225 676 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 PRR35P0CG20 571 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 GLB1P16278 677 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 NME5P56597 212 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 CORO7P57737 925 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 REEP5Q00765 189 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 CYP4F3Q08477 520 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 LAPTM5Q13571 262 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 AMZ1Q400G9 498 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 SWT1Q5T5J6 900 aaKnown RBP9.79□□□□□ -0.84
SRP54-208ENST00000555557 METTL21CQ5VZV1 264 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 ARMC6Q6NXE6 501 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 IRGCQ6NXR0 463 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 PRR23CQ6ZRP0 262 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 CHCHD4Q8N4Q1 142 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 FNDC5Q8NAU1 212 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 SUMF1Q8NBK3 374 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 NCSTNQ92542 709 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 APIPQ96GX9 242 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 CCT7Q99832 543 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 MACROD1Q9BQ69 325 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 ABCG4Q9H172 646 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 UCK1Q9HA47 277 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 PFDN4Q9NQP4 134 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 TMEM184CQ9NVA4 438 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 TRIM33Q9UPN9 1127 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 ENTPD2Q9Y5L3 495 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 COPG1Q9Y678 874 aaKnown RBP9.79□□□□□ -0.84
SRP54-208ENST00000555557 U3KQA8 63 aa9.79□□□□□ -0.84
SRP54-208ENST00000555557 PCDH15Q96QU1 1955 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 CPED1A4D0V7 1026 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 YKT6O15498 198 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 B4GAT1O43505 415 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 KIF1CO43896 1103 aaKnown RBP9.78□□□□□ -0.84
SRP54-208ENST00000555557 VPS4BO75351 444 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 UBOX5O94941 541 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 TBX6O95947 436 aaPredicted RBP9.78□□□□□ -0.84
SRP54-208ENST00000555557 SERPIND1P05546 499 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 ALPPL2P10696 532 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 CXCR2P25025 360 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 BCL6P41182 706 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 CAPZBP47756 277 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 GFERP55789 205 aa9.78□□□□□ -0.84
SRP54-208ENST00000555557 RPL38P63173 70 aaKnown RBP9.78□□□□□ -0.84
SRP54-208ENST00000555557 SF3A2Q15428 464 aaKnown RBP9.78□□□□□ -0.84
SRP54-208ENST00000555557 ZIC1Q15915 447 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms