RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 NOBOXO60393 691 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 EFCAB14O75071 495 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 SRPRAP08240 638 aaKnown RBP12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 PCNAP12004 261 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 IRS1P35568 1242 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 MAPK10P53779 464 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 FADDQ13158 208 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 GAB1Q13480 694 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 CPSF6Q16630 551 aaKnown RBP eCLIP12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 CCSMST1Q4G0I0 132 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 UBE2UQ5VVX9 321 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 GPR107Q5VW38 600 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 CCDC149Q6ZUS6 474 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 STK32CQ86UX6 486 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 RNF175Q8N4F7 328 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 ARL10Q8N8L6 244 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 TRIM43Q96BQ3 446 aaPredicted RBP12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 EGFL8Q99944 293 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 EMILIN2Q9BXX0 1053 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 ZNF717Q9BY31 904 aaPredicted RBP12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 TMEM38AQ9H6F2 299 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 FBXO8Q9NRD0 319 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 THSD1Q9NS62 852 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 VPS29Q9UBQ0 182 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 ICKQ9UPZ9 632 aa12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 RUVBL1Q9Y265 456 aaKnown RBP12.17□□□□□ -0.46
PPP4R3A-206ENST00000554943 ARRDC5A6NEK1 342 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 UPK3BL1B0FP48 263 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 UPK3BL2E5RIL1 263 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 TIMP1P01033 207 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 SYN1P17600 705 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 CYP2A7P20853 494 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 FPR1P21462 350 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 NFKBIAP25963 317 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 DNAJA1P31689 397 aaKnown RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 POLR2LP62875 67 aaKnown RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 DPTQ07507 201 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 ANKDD1AQ495B1 522 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 LDLRAP1Q5SW96 308 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 DOK6Q6PKX4 331 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 GCNT7Q6ZNI0 430 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 VN1R5Q7Z5H4 357 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 TSPYL5Q86VY4 417 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 OTUB2Q96DC9 234 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 HRASLS5Q96KN8 279 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 PKP4Q99569 1192 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 FUNDC2Q9BWH2 189 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 PCDH12Q9NPG4 1184 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 SH3BP1Q9Y3L3 701 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 PRR19A6NJB7 356 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 CLIC1O00299 241 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 MYCLP1P12525 358 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 ZNF8P17098 575 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 KIR3DL1P43629 444 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 PNLIPRP1P54315 467 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 SPCS2Q15005 226 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 OTUD3Q5T2D3 398 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 ZNF648Q5T619 568 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 PLPP4Q5VZY2 271 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 C11orf96Q7Z7L8 435 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 EGFL6Q8IUX8 553 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 ZDHHC21Q8IVQ6 265 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 ZC3H7AQ8IWR0 971 aaKnown RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 ETFBKMTQ8IXQ9 262 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 CLHC1Q8NHS4 586 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 RAD9AQ99638 391 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 FUZQ9BT04 418 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 THUMPD3Q9BV44 507 aaKnown RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 BHLHE41Q9C0J9 482 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 NXF2Q9GZY0 626 aaKnown RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 ABCG8Q9H221 673 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 IRAK4Q9NWZ3 460 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 NDOR1Q9UHB4 597 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 MAPRE3Q9UPY8 281 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 SH2B3Q9UQQ2 575 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 CORINQ9Y5Q5 1042 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 DSPPQ9NZW4 1301 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 CHD9Q3L8U1 2897 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 GOLGA4Q13439 2230 aaKnown RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 BCAS1O75363 584 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 C1orf105O95561 183 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 FTH1P02794 183 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 CCL5P13501 91 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 ENGP17813 658 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 BMXP51813 675 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 CTSCP53634 463 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 IRF3Q14653 427 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 ZIK1Q3SY52 487 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 ZNF385BQ569K4 471 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 Q6ZVU0 165 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 SMYD1Q8NB12 490 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 VN1R2Q8NFZ6 395 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 SNRNP27Q8WVK2 155 aaKnown RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 ASZ1Q8WWH4 475 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 STARD8Q92502 1023 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 SMG9Q9H0W8 520 aaKnown RBP12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 V9GYQ6 96 aa12.16□□□□□ -0.46
PPP4R3A-206ENST00000554943 HOXC11O43248 304 aaPredicted RBP12.15□□□□□ -0.46
PPP4R3A-206ENST00000554943 LAMP1P11279 417 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms