RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 C12orf66Q96MD2 445 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 CYP2S1Q96SQ9 504 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 TREM1Q9NP99 234 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 SLC22A14Q9Y267 594 aa13.58□□□□□ -0.24
VTI1B-204ENST00000554659 MED1Q15648 1581 aaPredicted RBP13.57□□□□□ -0.24
VTI1B-204ENST00000554659 M0QX08 132 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 RBM34P42696 430 aaKnown RBP13.57□□□□□ -0.24
VTI1B-204ENST00000554659 CASP9P55211 416 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 OLIG2Q13516 323 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 SERINC3Q13530 473 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 ZMYND11Q15326 602 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.57□□□□□ -0.24
VTI1B-204ENST00000554659 RBM23Q86U06 439 aaKnown RBP13.57□□□□□ -0.24
VTI1B-204ENST00000554659 COQ8BQ96D53 544 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 HTATIP2Q9BUP3 242 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 GPR88Q9GZN0 384 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 ZDHHC4Q9NPG8 344 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 RBPJLQ9UBG7 517 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 TNFRSF10DQ9UBN6 386 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 ASB3Q9Y575 518 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 FANCGO15287 622 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 HLA-DPB1P04440 258 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 CSN2P05814 226 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 PGAM2P15259 253 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 ACVRL1P37023 503 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 NRG3P56975 720 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 TOR1AIP1Q5JTV8 583 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 SPANXN4Q5MJ08 99 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 PRAMEF14Q5SWL7 426 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 PRAMEF13Q5VWM6 474 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 XKR5Q6UX68 686 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 GDPD4Q6W3E5 623 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 NXPE1Q8N323 547 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 TXNDC5Q8NBS9 432 aaKnown RBP13.57□□□□□ -0.24
VTI1B-204ENST00000554659 C1orf216Q8TAB5 229 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 GPR151Q8TDV0 419 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 NUS1Q96E22 293 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 SRMSQ9H3Y6 488 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 LIN28AQ9H9Z2 209 aaKnown RBP13.57□□□□□ -0.24
VTI1B-204ENST00000554659 TPT1P8Q9HAU6 139 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 SIX4Q9UIU6 781 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 PEAK1Q9H792 1746 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.57□□□□□ -0.24
VTI1B-204ENST00000554659 TGFB1P01137 390 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF3P17036 446 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 GFOD2Q3B7J2 385 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 CHADLQ6NUI6 762 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 CENPSQ8N2Z9 138 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 TOMM5Q8N4H5 51 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 SLC30A2Q9BRI3 323 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 CCM2Q9BSQ5 444 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 ADAM7Q9H2U9 754 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 SEC14L4Q9UDX3 406 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 GPN3Q9UHW5 284 aaPredicted RBP13.57□□□□□ -0.24
VTI1B-204ENST00000554659 ABCC6O95255 1503 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 TRBV23OR9-2A0A075B6M9 112 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 TACSTD2P09758 323 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 ATP1B2P14415 290 aaPredicted RBP13.57□□□□□ -0.24
VTI1B-204ENST00000554659 RPL17P18621 184 aaKnown RBP13.57□□□□□ -0.24
VTI1B-204ENST00000554659 NUDT6P53370 316 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 OCLNQ16625 522 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 XKR4Q5GH76 650 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 IQCHQ86VS3 1027 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 PLCZ1Q86YW0 608 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 CCDC107Q8WV48 283 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 PKP4Q99569 1192 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 TMEM248Q9NWD8 314 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 CACNG4Q9UBN1 327 aa13.57□□□□□ -0.24
VTI1B-204ENST00000554659 H0YJX3 145 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 UBXN7O94888 489 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF823P16415 610 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 FSHRP23945 695 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 RPL6Q02878 288 aaKnown RBP13.56□□□□□ -0.24
VTI1B-204ENST00000554659 ADAM15Q13444 863 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 THOC6Q86W42 341 aaKnown RBP13.56□□□□□ -0.24
VTI1B-204ENST00000554659 OR8J3Q8NGG0 315 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 KNDC1Q76NI1 1749 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 FXYD6-FXYD2A0A087WZ82 144 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 RENP00797 406 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 BCHEP06276 602 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 PPP1R8Q12972 351 aaKnown RBP13.56□□□□□ -0.24
VTI1B-204ENST00000554659 BRAT1Q6PJG6 821 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 NAPRTQ6XQN6 538 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 CYS1Q717R9 158 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 SDR16C5Q8N3Y7 309 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 OR6K6Q8NGW6 343 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 OR5AK3PQ8NH89 298 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 NFKBIDQ8NI38 313 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 KCNJ9Q92806 393 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 KCNA7Q96RP8 456 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 FXYD6Q9H0Q3 95 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 NEUROD4Q9HD90 331 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 NLE1Q9NVX2 485 aaPredicted RBP13.56□□□□□ -0.24
VTI1B-204ENST00000554659 LMO7Q8WWI1 1683 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 UBR1Q8IWV7 1749 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 GABBR2O75899 941 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 HPRP00739 348 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 WASP42768 502 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 SH3D19Q5HYK7 790 aa13.56□□□□□ -0.24
VTI1B-204ENST00000554659 PRPF38BQ5VTL8 546 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms