RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 IRAK4Q9NWZ3 460 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 PLA2G3Q9NZ20 509 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 PTGFRNQ9P2B2 879 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 RSPH14Q9UHP6 348 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 SH3BGRL2Q9UJC5 107 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 TINAGQ9UJW2 476 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 CAPN11Q9UMQ6 739 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 ASF1AQ9Y294 204 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 PRSS21Q9Y6M0 314 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 ZNF407Q9C0G0 2248 aa6.93□□□□□ -1.3
ATXN3-219ENST00000553488 hCG_1818297A0A087WSY0 165 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 SLC5A10A0PJK1 596 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 DYTNA2CJ06 578 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 ISM1B1AKI9 464 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 H7C0S8 307 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 NRP2O60462 931 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 SLC19A2O60779 497 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 CTSVO60911 334 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 AP2A2O94973 939 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 CLDN14O95500 239 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 AP2A1O95782 977 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 WDPCPO95876 746 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 F10P00742 488 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 SERPINA7P05543 415 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 ZGLP1P0C6A0 271 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 PIM1P11309 404 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-219ENST00000553488 FDXRP22570 491 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 PSMB4P28070 264 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 CARSP49589 748 aaKnown RBP6.92□□□□□ -1.3
ATXN3-219ENST00000553488 RAB28P51157 221 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 EFNA3P52797 238 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 GEMP55040 296 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 PMP22Q01453 160 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 CACNG1Q06432 222 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 GRM7Q14831 915 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 SLC18A3Q16572 532 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 OGFOD2Q6N063 350 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 HIBCHQ6NVY1 386 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-219ENST00000553488 PACS1Q6VY07 963 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 Q6ZPB1 254 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-219ENST00000553488 NCCRP1Q6ZVX7 275 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-219ENST00000553488 BZW1Q7L1Q6 419 aaKnown RBP6.92□□□□□ -1.3
ATXN3-219ENST00000553488 TSPYL5Q86VY4 417 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-219ENST00000553488 KLHDC8BQ8IXV7 354 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 KBTBD2Q8IY47 623 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 SIRT6Q8N6T7 355 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 POU5F2Q8N7G0 328 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 AMER2Q8N7J2 671 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 LMNTD1Q8N9Z9 388 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 SLC35G2Q8TBE7 412 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 STT3BQ8TCJ2 826 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 ADAMTS18Q8TE60 1221 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 DENND1AQ8TEH3 1009 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 HAUS1Q96CS2 278 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 MTFMTQ96DP5 389 aaKnown RBP6.92□□□□□ -1.3
ATXN3-219ENST00000553488 VPS50Q96JG6 964 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 DNAJC1Q96KC8 554 aaKnown RBP6.92□□□□□ -1.3
ATXN3-219ENST00000553488 C10orf90Q96M02 699 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 ENKD1Q9H0I2 346 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 MCCC2Q9HCC0 563 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 LUC7LQ9NQ29 371 aaKnown RBP6.92□□□□□ -1.3
ATXN3-219ENST00000553488 DDX56Q9NY93 547 aaKnown RBP6.92□□□□□ -1.3
ATXN3-219ENST00000553488 SEC14L3Q9UDX4 400 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 POLG2Q9UHN1 485 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 TRHDEQ9UKU6 1024 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 ZNF835Q9Y2P0 537 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 TDRKHQ9Y2W6 561 aaKnown RBP6.92□□□□□ -1.3
ATXN3-219ENST00000553488 MAU2Q9Y6X3 613 aa6.92□□□□□ -1.3
ATXN3-219ENST00000553488 LOC102723996A0A087X1L8 192 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 IGHV1-45A0A0A0MS14 117 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 NSG1A0A0A6YYJ2 146 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 HACD1B0YJ81 288 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 ANXA9O76027 345 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 RASAL1O95294 804 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 BMP10O95393 424 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 CRTAMO95727 393 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 CRYABP02511 175 aaKnown RBP6.91□□□□□ -1.3
ATXN3-219ENST00000553488 ITGAMP11215 1152 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 IGFBP2P18065 325 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 RBL1P28749 1068 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 GDNFP39905 211 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 GRIA3P42263 894 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 ARHGAP25P42331 645 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 NSG1P42857 185 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 TLE4Q04727 773 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 EEF1A2Q05639 463 aaKnown RBP6.91□□□□□ -1.3
ATXN3-219ENST00000553488 RBPJQ06330 500 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 TFDP2Q14188 446 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 IQCB1Q15051 598 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 PCOLCEQ15113 449 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 TCTE1Q5JU00 501 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 KAZNQ674X7 775 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 CNSTQ6PJW8 725 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 NAPRTQ6XQN6 538 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 ARHGEF18Q6ZSZ5 1173 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 NDUFAF7Q7L592 441 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 TAX1BP1Q86VP1 789 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 PRSS58Q8IYP2 241 aa6.91□□□□□ -1.3
ATXN3-219ENST00000553488 TTC29Q8NA56 475 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-219ENST00000553488 CCDC110Q8TBZ0 833 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms