RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 EME1Q96AY2 570 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 MRPS26Q9BYN8 205 aaKnown RBP9.62□□□□□ -0.87
RAB5B-206ENST00000549505 ASPSCR1Q9BZE9 553 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 ZNHIT2Q9UHR6 403 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 A0A1W2PPV9 198 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 LINC01565O15544 149 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 PRICKLE3O43900 615 aaPredicted RBP9.62□□□□□ -0.87
RAB5B-206ENST00000549505 KIR3DL1P43629 444 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 FGL2Q14314 439 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 CYP51A1Q16850 503 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 TMEM196Q5HYL7 178 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 ZC3H12BQ5HYM0 836 aaKnown RBP9.62□□□□□ -0.87
RAB5B-206ENST00000549505 FAM71E1Q6IPT2 247 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 CCDC80Q76M96 950 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 VN1R5Q7Z5H4 357 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 GPR180Q86V85 440 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 CFAP206Q8IYR0 622 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 SYNPOQ8N3V7 929 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 DNASE1L2Q92874 299 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 PYCR2Q96C36 320 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 RAB11FIP5Q9BXF6 653 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 ATG10Q9H0Y0 220 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 IL1RL2Q9HB29 575 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 SGK2Q9HBY8 427 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 SLC6A13Q9NSD5 602 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 DYRK1BQ9Y463 629 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 PCDHB11Q9Y5F2 797 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 PCYT1BQ9Y5K3 369 aaPredicted RBP9.62□□□□□ -0.87
RAB5B-206ENST00000549505 TICRRQ7Z2Z1 1910 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 SMIM31A0A1B0GVY4 71 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 PIPSLA2A3N6 862 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 SOCS2O14508 198 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 INPP4BO15327 924 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 CLOCKO15516 846 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 TIPRLO75663 272 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 CCNDBP1O95273 360 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 ETHE1O95571 254 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 IGLV3-19P01714 112 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 EPHX1P07099 455 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 GALK1P51570 392 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 NEK2P51955 445 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 TRA2BP62995 288 aaKnown RBP9.62□□□□□ -0.87
RAB5B-206ENST00000549505 GK3PQ14409 553 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 ZNF551Q7Z340 670 aaPredicted RBP9.62□□□□□ -0.87
RAB5B-206ENST00000549505 TRMT11Q7Z4G4 463 aaKnown RBP9.62□□□□□ -0.87
RAB5B-206ENST00000549505 TRIM69Q86WT6 500 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 FGF14Q92915 247 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 PPM1MQ96MI6 270 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 RNF145Q96MT1 663 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 BDH2Q9BUT1 245 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 BTBD1Q9H0C5 482 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 CCDC177Q9NQR7 707 aaPredicted RBP9.62□□□□□ -0.87
RAB5B-206ENST00000549505 PCOLCE2Q9UKZ9 415 aa9.62□□□□□ -0.87
RAB5B-206ENST00000549505 A0A1W2PQF6 199 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 MYO1DO94832 1006 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 MRPS21P82921 87 aaKnown RBP9.61□□□□□ -0.87
RAB5B-206ENST00000549505 MLC1Q15049 377 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 TBC1D25Q3MII6 688 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 FAM98BQ52LJ0 330 aaKnown RBP9.61□□□□□ -0.87
RAB5B-206ENST00000549505 HEATR4Q86WZ0 1026 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 ST13P4Q8IZP2 240 aaPredicted RBP9.61□□□□□ -0.87
RAB5B-206ENST00000549505 PSMA8Q8TAA3 256 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 FBLIM1Q8WUP2 373 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 HBEGFQ99075 208 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 CHID1Q9BWS9 393 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 TRIM4Q9C037 500 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 C8orf33Q9H7E9 229 aaPredicted RBP9.61□□□□□ -0.87
RAB5B-206ENST00000549505 DLGAP2Q9P1A6 1054 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 DNAJB9Q9UBS3 223 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 EGFL7Q9UHF1 273 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 ERVK-11Q9UQG0 969 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.61□□□□□ -0.87
RAB5B-206ENST00000549505 KLK4Q9Y5K2 254 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 IGLON5A6NGN9 336 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 MAGEB17A8MXT2 336 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 CXCR6O00574 342 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 MID1O15344 667 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 TBX6O95947 436 aaPredicted RBP9.61□□□□□ -0.87
RAB5B-206ENST00000549505 LDLRP01130 860 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 FAM58BPP0C7Q3 252 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 MTHFD1P11586 935 aaKnown RBP9.61□□□□□ -0.87
RAB5B-206ENST00000549505 PTX3P26022 381 aaPredicted RBP9.61□□□□□ -0.87
RAB5B-206ENST00000549505 NTSR1P30989 418 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 MTPNP58546 118 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 PHEXP78562 749 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 IRF4Q15306 451 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 FOXB2Q5VYV0 432 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 ZBTB49Q6ZSB9 765 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 R3HCC1LQ7Z5L2 792 aaKnown RBP9.61□□□□□ -0.87
RAB5B-206ENST00000549505 RALGPS2Q86X27 583 aaPredicted RBP9.61□□□□□ -0.87
RAB5B-206ENST00000549505 ZZZ3Q8IYH5 903 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 NRBF2Q96F24 287 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 ZNF717Q9BY31 904 aaPredicted RBP9.61□□□□□ -0.87
RAB5B-206ENST00000549505 PNPLA3Q9NST1 481 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 SLC23A2Q9UGH3 650 aa9.61□□□□□ -0.87
RAB5B-206ENST00000549505 TSR3Q9UJK0 312 aaKnown RBP9.61□□□□□ -0.87
RAB5B-206ENST00000549505 H3BNH8 94 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 CREG1O75629 220 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 KCNK5O95279 499 aa9.6□□□□□ -0.87
RAB5B-206ENST00000549505 EPS8Q12929 822 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms