RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 SP2Q02086 613 aa15.05■□□□□ -0
CHD4-210ENST00000544040 SP3Q02447 781 aa15.05■□□□□ -0
CHD4-210ENST00000544040 TLE2Q04725 743 aa15.05■□□□□ -0
CHD4-210ENST00000544040 PRSS55Q6UWB4 352 aaPredicted RBP15.05■□□□□ -0
CHD4-210ENST00000544040 AQP12AQ8IXF9 295 aa15.05■□□□□ -0
CHD4-210ENST00000544040 DGAT2Q96PD7 388 aa15.05■□□□□ -0
CHD4-210ENST00000544040 C14orf105Q9NVL8 296 aa15.05■□□□□ -0
CHD4-210ENST00000544040 CNTN3Q9P232 1028 aa15.05■□□□□ -0
CHD4-210ENST00000544040 CLCA3PQ9Y6N3 262 aa15.05■□□□□ -0
CHD4-210ENST00000544040 A0A1B0GVC2 190 aa15.04■□□□□ -0
CHD4-210ENST00000544040 NPIPA5E9PKD4 350 aa15.04■□□□□ -0
CHD4-210ENST00000544040 BLOC1S5-TXNDC5H3BN57 136 aa15.04■□□□□ -0
CHD4-210ENST00000544040 VILLO15195 856 aa15.04■□□□□ -0
CHD4-210ENST00000544040 RNF144AP50876 292 aaPredicted RBP15.04■□□□□ -0
CHD4-210ENST00000544040 E2F1Q01094 437 aa15.04■□□□□ -0
CHD4-210ENST00000544040 HNRNPA0Q13151 305 aaKnown RBP15.04■□□□□ -0
CHD4-210ENST00000544040 MBOAT1Q6ZNC8 495 aa15.04■□□□□ -0
CHD4-210ENST00000544040 C1orf52Q8N6N3 182 aaKnown RBP15.04■□□□□ -0
CHD4-210ENST00000544040 OR52E4Q8NGH9 312 aa15.04■□□□□ -0
CHD4-210ENST00000544040 NPIPA1Q9UND3 350 aa15.04■□□□□ -0
CHD4-210ENST00000544040 STXBP5LQ9Y2K9 1186 aa15.04■□□□□ -0
CHD4-210ENST00000544040 PEX10O60683 326 aa15.04■□□□□ -0
CHD4-210ENST00000544040 MRPL3P09001 348 aaKnown RBP15.04■□□□□ -0
CHD4-210ENST00000544040 CD72P21854 359 aa15.04■□□□□ -0
CHD4-210ENST00000544040 ABI3Q9P2A4 366 aa15.04■□□□□ -0
CHD4-210ENST00000544040 RNF6Q9Y252 685 aa15.04■□□□□ -0
CHD4-210ENST00000544040 CLIC3O95833 236 aa15.04■□□□□ -0
CHD4-210ENST00000544040 ELNP15502 786 aa15.04■□□□□ -0
CHD4-210ENST00000544040 ELK4P28324 431 aa15.04■□□□□ -0
CHD4-210ENST00000544040 ADH7P40394 386 aa15.04■□□□□ -0
CHD4-210ENST00000544040 CCDC58Q4VC31 144 aa15.04■□□□□ -0
CHD4-210ENST00000544040 LRRN1Q6UXK5 716 aa15.04■□□□□ -0
CHD4-210ENST00000544040 FAM163AQ96GL9 167 aaPredicted RBP15.04■□□□□ -0
CHD4-210ENST00000544040 CGREF1Q99674 301 aa15.04■□□□□ -0
CHD4-210ENST00000544040 UTS2RQ9UKP6 389 aa15.04■□□□□ -0
CHD4-210ENST00000544040 ZNF705EA8MWA4 302 aaPredicted RBP15.04■□□□□ -0
CHD4-210ENST00000544040 SLC7A4O43246 635 aa15.04■□□□□ -0
CHD4-210ENST00000544040 ACP5P13686 325 aa15.04■□□□□ -0
CHD4-210ENST00000544040 TGFBIQ15582 683 aa15.04■□□□□ -0
CHD4-210ENST00000544040 USP50Q70EL3 339 aaPredicted RBP15.04■□□□□ -0
CHD4-210ENST00000544040 ABHD13Q7L211 337 aa15.04■□□□□ -0
CHD4-210ENST00000544040 AMZ2Q86W34 360 aa15.04■□□□□ -0
CHD4-210ENST00000544040 CENPSQ8N2Z9 138 aa15.04■□□□□ -0
CHD4-210ENST00000544040 NUS1Q96E22 293 aa15.04■□□□□ -0
CHD4-210ENST00000544040 DEFB118Q96PH6 123 aa15.04■□□□□ -0
CHD4-210ENST00000544040 IL12RB2Q99665 862 aa15.04■□□□□ -0
CHD4-210ENST00000544040 OR51I1Q9H343 314 aa15.04■□□□□ -0
CHD4-210ENST00000544040 CCSER2Q9H7U1 834 aa15.04■□□□□ -0
CHD4-210ENST00000544040 APOBEC3GQ9HC16 384 aaKnown RBP15.04■□□□□ -0
CHD4-210ENST00000544040 SLC39A1Q9NY26 324 aa15.04■□□□□ -0
CHD4-210ENST00000544040 EDARQ9UNE0 448 aa15.04■□□□□ -0
CHD4-210ENST00000544040 SLC22A2O15244 555 aa15.04■□□□□ -0
CHD4-210ENST00000544040 PPP1R11O60927 126 aaPredicted RBP15.04■□□□□ -0
CHD4-210ENST00000544040 ZNF14P17017 642 aaPredicted RBP15.04■□□□□ -0
CHD4-210ENST00000544040 GNG2P59768 71 aa15.04■□□□□ -0
CHD4-210ENST00000544040 EIF5AL1Q6IS14 154 aaKnown RBP15.04■□□□□ -0
CHD4-210ENST00000544040 NIPAL1Q6NVV3 410 aa15.04■□□□□ -0
CHD4-210ENST00000544040 HCAR2Q8TDS4 363 aa15.04■□□□□ -0
CHD4-210ENST00000544040 TMEM80Q96HE8 168 aa15.04■□□□□ -0
CHD4-210ENST00000544040 ENY2Q9NPA8 101 aa15.04■□□□□ -0
CHD4-210ENST00000544040 SLC38A8A6NNN8 435 aa15.03■□□□□ -0
CHD4-210ENST00000544040 H7C2Y5 167 aa15.03■□□□□ -0
CHD4-210ENST00000544040 PRPS1L1P21108 318 aa15.03■□□□□ -0
CHD4-210ENST00000544040 PTP4A2Q12974 167 aa15.03■□□□□ -0
CHD4-210ENST00000544040 CERS5Q8N5B7 392 aa15.03■□□□□ -0
CHD4-210ENST00000544040 CAMK1GQ96NX5 476 aa15.03■□□□□ -0
CHD4-210ENST00000544040 A0A0J9YVX5 310 aa15.03■□□□□ -0
CHD4-210ENST00000544040 ILVBLA1L0T0 632 aa15.03■□□□□ -0
CHD4-210ENST00000544040 ERI3O43414 337 aaKnown RBP15.03■□□□□ -0
CHD4-210ENST00000544040 PI15O43692 258 aa15.03■□□□□ -0
CHD4-210ENST00000544040 RP2O75695 350 aa15.03■□□□□ -0
CHD4-210ENST00000544040 ATP5A1P25705 553 aaKnown RBP15.03■□□□□ -0
CHD4-210ENST00000544040 SLC9A3P48764 834 aa15.03■□□□□ -0
CHD4-210ENST00000544040 NR0B1P51843 470 aaKnown RBP15.03■□□□□ -0
CHD4-210ENST00000544040 WDR4P57081 412 aaKnown RBP15.03■□□□□ -0
CHD4-210ENST00000544040 OC90Q02509 493 aaPredicted RBP15.03■□□□□ -0
CHD4-210ENST00000544040 CDK10Q15131 360 aa15.03■□□□□ -0
CHD4-210ENST00000544040 TBRG1Q3YBR2 411 aa15.03■□□□□ -0
CHD4-210ENST00000544040 SFT2D3Q587I9 215 aa15.03■□□□□ -0
CHD4-210ENST00000544040 SLC35F1Q5T1Q4 408 aa15.03■□□□□ -0
CHD4-210ENST00000544040 DNAJB7Q7Z6W7 309 aaPredicted RBP15.03■□□□□ -0
CHD4-210ENST00000544040 ZNF527Q8NB42 609 aa15.03■□□□□ -0
CHD4-210ENST00000544040 SCAMP5Q8TAC9 235 aa15.03■□□□□ -0
CHD4-210ENST00000544040 DCAKDQ8WVC6 231 aa15.03■□□□□ -0
CHD4-210ENST00000544040 PYURFQ96I23 114 aa15.03■□□□□ -0
CHD4-210ENST00000544040 HSH2DQ96JZ2 352 aa15.03■□□□□ -0
CHD4-210ENST00000544040 SLC22A14Q9Y267 594 aa15.03■□□□□ -0
CHD4-210ENST00000544040 DISC1C4P0D8 188 aa15.03■□□□□ -0
CHD4-210ENST00000544040 M0R233 179 aa15.03■□□□□ -0
CHD4-210ENST00000544040 HAS3O00219 553 aa15.03■□□□□ -0
CHD4-210ENST00000544040 LDB2O43679 373 aa15.03■□□□□ -0
CHD4-210ENST00000544040 RAB36O95755 333 aa15.03■□□□□ -0
CHD4-210ENST00000544040 DGKGP49619 791 aa15.03■□□□□ -0
CHD4-210ENST00000544040 ACADVLP49748 655 aa15.03■□□□□ -0
CHD4-210ENST00000544040 MLLT1Q03111 559 aaPredicted RBP15.03■□□□□ -0
CHD4-210ENST00000544040 DUOXA1Q1HG43 343 aa15.03■□□□□ -0
CHD4-210ENST00000544040 OTOP2Q7RTS6 562 aa15.03■□□□□ -0
CHD4-210ENST00000544040 NUDT13Q86X67 352 aa15.03■□□□□ -0
CHD4-210ENST00000544040 C7orf34Q96L11 122 aa15.03■□□□□ -0
CHD4-210ENST00000544040 ANKHQ9HCJ1 492 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms