RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 SMIM24O75264 130 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 GLRA3O75311 464 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 SIX3O95343 332 aaPredicted RBP14.42□□□□□ -0.1
CD9-210ENST00000543916 STATHP02808 62 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 EIF2S1P05198 315 aaKnown RBP14.42□□□□□ -0.1
CD9-210ENST00000543916 C1GALT1C1LP0DN25 315 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 KRT4P19013 534 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 GNAZP19086 355 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 VARSP26640 1264 aaKnown RBP14.42□□□□□ -0.1
CD9-210ENST00000543916 RORAP35398 523 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 RPS15AP62244 130 aaKnown RBP14.42□□□□□ -0.1
CD9-210ENST00000543916 REEP5Q00765 189 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 SLC18A2Q05940 514 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 SRSF6Q13247 344 aaKnown RBP14.42□□□□□ -0.1
CD9-210ENST00000543916 HKDC1Q2TB90 917 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 PRTGQ2VWP7 1150 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 KRT71Q3SY84 523 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 TCTE1Q5JU00 501 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 TLDC1Q6P9B6 456 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 SLCO4C1Q6ZQN7 724 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 VN1R4Q7Z5H5 301 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 VASH2Q86V25 355 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 SPACA3Q8IXA5 215 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 MYRIPQ8NFW9 859 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 CLIP3Q96DZ5 547 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 PHF21BQ96EK2 531 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 DPH1Q9BZG8 443 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 C12orf65Q9H3J6 166 aaKnown RBP14.42□□□□□ -0.1
CD9-210ENST00000543916 GPRC5BQ9NZH0 403 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 DHCR7Q9UBM7 475 aaKnown RBP14.42□□□□□ -0.1
CD9-210ENST00000543916 DCDC2Q9UHG0 476 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 PCDHGA4Q9Y5G9 962 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 AP1M2Q9Y6Q5 423 aa14.42□□□□□ -0.1
CD9-210ENST00000543916 SPTBP11277 2137 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 KCNE1BA0A087WTH5 132 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 A0A087WV48 116 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 LOC101059948A0A1B0GTJ6 334 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 TRBC2A0A5B9 178 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 CLGNO14967 610 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 RRP8O43159 456 aaKnown RBP14.41□□□□□ -0.1
CD9-210ENST00000543916 MED26O95402 600 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 ITPKBP27987 946 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 EEF1DP29692 281 aaKnown RBP14.41□□□□□ -0.1
CD9-210ENST00000543916 STAT5AP42229 794 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 SNRPNP63162 240 aaKnown RBP14.41□□□□□ -0.1
CD9-210ENST00000543916 GRM7Q14831 915 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 PCBP2Q15366 365 aaKnown RBP eCLIP14.41□□□□□ -0.1
CD9-210ENST00000543916 ST3GAL2Q16842 350 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 ZNF385CQ66K41 422 aaPredicted RBP14.41□□□□□ -0.1
CD9-210ENST00000543916 ATG9BQ674R7 924 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 LCN10Q6JVE6 187 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 RHBDD2Q6NTF9 364 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 FAM199XQ6PEV8 388 aaPredicted RBP14.41□□□□□ -0.1
CD9-210ENST00000543916 SRRM1Q8IYB3 904 aaKnown RBP14.41□□□□□ -0.1
CD9-210ENST00000543916 DSELQ8IZU8 1212 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 ESX1Q8N693 406 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 TEX9Q8N6V9 391 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 CSNK1A1LQ8N752 337 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 MFSD9Q8NBP5 474 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 RERGQ96A58 199 aaPredicted RBP14.41□□□□□ -0.1
CD9-210ENST00000543916 LRFN5Q96NI6 719 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 NDC1Q9BTX1 674 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 SARGQ9BW04 601 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 CAPS2Q9BXY5 557 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 SLC7A5P2Q9GIP4 190 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 WDR70Q9NW82 654 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 GEMIN8Q9NWZ8 242 aaKnown RBP14.41□□□□□ -0.1
CD9-210ENST00000543916 MKS1Q9NXB0 559 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 TMCO1Q9UM00 188 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 SRPK3Q9UPE1 567 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 SSUH2Q9Y2M2 353 aa14.41□□□□□ -0.1
CD9-210ENST00000543916 ZZEF1O43149 2961 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 STX16-NPEPL1H3BU86 382 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 MEN1O00255 615 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 E2F3O00716 465 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 COPEO14579 308 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 STX16O14662 325 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 OR1F1O43749 312 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 DLX3O60479 287 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 PROCP04070 461 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 HBQ1P09105 142 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 CD22P20273 847 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 CRHR1P34998 444 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 GRK3P35626 688 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 ATP1A2P50993 1020 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 TLE3Q04726 772 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 ABHD18Q0P651 414 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 DOC2AQ14183 400 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 SLBPQ14493 270 aaKnown RBP eCLIP14.4□□□□□ -0.1
CD9-210ENST00000543916 CEP85LQ5SZL2 805 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 C1orf189Q5VU69 101 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 LRIG3Q6UXM1 1119 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 GOLGA7Q7Z5G4 137 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 ARHGEF39Q8N4T4 335 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 DTWD1Q8N5C7 304 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 IL22RA1Q8N6P7 574 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 BANPQ8N9N5 519 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 ANKRD53Q8N9V6 530 aa14.4□□□□□ -0.1
CD9-210ENST00000543916 TTC29Q8NA56 475 aaPredicted RBP14.4□□□□□ -0.1
CD9-210ENST00000543916 TM4SF19Q96DZ7 209 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms