RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	OR6C1	Q96RD1	312 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	ZFYVE21	Q9BQ24	234 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	TRMO	Q9BU70	441 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	EHD1	Q9H4M9	534 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	GSTO2	Q9H4Y5	243 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	ZBTB26	Q9HCK0	441 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	GEMIN8	Q9NWZ8	242 aa	Known RBP	9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	OCIAD1	Q9NX40	245 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	SLC39A1	Q9NY26	324 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	SEMA5B	Q9P283	1151 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	SERTAD3	Q9UJW9	196 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	RARRES3	Q9UL19	164 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	BTRC	Q9Y297	605 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	STK38L	Q9Y2H1	464 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	RNF11	Q9Y3C5	154 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	PCNX2	A6NKB5	2137 aa		9.74	□□□□□ -0.85
CPSF7-221	ENST00000543545	ZNF292	O60281	2723 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	TRBC2	A0A5B9	178 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	ANKDD1B	A6NHY2	528 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	TMEM150C	B9EJG8	249 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	FFAR3	O14843	346 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	PLD2	O14939	933 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	GPR42	O15529	346 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	HYAL3	O43820	417 aa	Predicted RBP	9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	NPHS1	O60500	1241 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	OR4F21	O95013	312 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	HSPA4L	O95757	839 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	STATH	P02808	62 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	HGF	P14210	728 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	GRK2	P25098	689 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	HMOX2	P30519	316 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	HOXD11	P31277	338 aa	Predicted RBP	9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	SERPINB5	P36952	375 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	BCL6	P41182	706 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	HNF4A	P41235	474 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	PKNOX1	P55347	436 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	VSX2	P58304	361 aa	Predicted RBP	9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	ERVPABLB-1	P60509	514 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	CYP4F2	P78329	520 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	REEP5	Q00765	189 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	EIF3I	Q13347	325 aa	Known RBP	9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	DDX39B	Q13838	428 aa	Known RBP	9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	RCN2	Q14257	317 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	SGO1	Q5FBB7	561 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	ARL13A	Q5H913	290 aa	Predicted RBP	9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	C3orf38	Q5JPI3	329 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	GRHL2	Q6ISB3	625 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	MED27	Q6P2C8	311 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	CYB5D1	Q6P9G0	228 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	TMIGD1	Q6UXZ0	262 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	FRMD7	Q6ZUT3	714 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	SYVN1	Q86TM6	617 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	GPR135	Q8IZ08	494 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	CACTIN-AS1	Q8N1I8	211 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	DNAJC22	Q8N4W6	341 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	CDYL2	Q8N8U2	506 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	MFSD9	Q8NBP5	474 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	ZNF740	Q8NDX6	193 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	OR4F6	Q8NGB9	312 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	OR4K1	Q8NGD4	311 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	WDR36	Q8NI36	951 aa	Known RBP	9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	METTL6	Q8TCB7	284 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	REPS1	Q96D71	796 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	MTFMT	Q96DP5	389 aa	Known RBP	9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	THAP11	Q96EK4	314 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	LIN37	Q96GY3	246 aa	Predicted RBP	9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	MAGEB10	Q96LZ2	347 aa	Predicted RBP	9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	ZNF382	Q96SR6	550 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	CTRC	Q99895	268 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	NTMT1	Q9BV86	223 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	NLN	Q9BYT8	704 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	SLC7A5P2	Q9GIP4	190 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	SPNS1	Q9H2V7	528 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	MANSC1	Q9H8J5	431 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	FGF21	Q9NSA1	209 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	PISD	Q9UG56	409 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	KLK4	Q9Y5K2	254 aa		9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	CNOT1	A5YKK6	2376 aa	Known RBP	9.73	□□□□□ -0.85
CPSF7-221	ENST00000543545	LOC105369274	A0A096LPK9	316 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	LOC102723532	A0A0G2JNH3	316 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	TMEM114	B3SHH9	223 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545		B4E171	279 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545		H0YGG7	62 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	POLR1C	O15160	346 aa	Predicted RBP	9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	LCMT2	O60294	686 aa	Known RBP	9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	SRPX2	O60687	465 aa	Predicted RBP	9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	UGDH	O60701	494 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	PRAMEF4	O60810	478 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	OR2B3	O76000	313 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	WFS1	O76024	890 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	ESRRB	O95718	433 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	ITIH1	P19827	911 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	CD22	P20273	847 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	TSPAN7	P41732	249 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	CASP2	P42575	452 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	SCTR	P47872	440 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	SLC1A6	P48664	564 aa		9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	ARF3	P61204	181 aa	Predicted RBP	9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	ABCE1	P61221	599 aa	Known RBP	9.72	□□□□□ -0.85
CPSF7-221	ENST00000543545	PHEX	P78562	749 aa		9.72	□□□□□ -0.85

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms