RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 DCBLD2Q96PD2 775 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 FCRL4Q96PJ5 515 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 FAM111AQ96PZ2 611 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 EFCAB11Q9BUY7 163 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 YIPF2Q9BWQ6 316 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 SPRTNQ9H040 489 aaPredicted RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 DRC3Q9H069 523 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 C12orf65Q9H3J6 166 aaKnown RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 NOL11Q9H8H0 719 aaKnown RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 IPPKQ9H8X2 491 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 ACTR8Q9H981 624 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 ACTR5Q9H9F9 607 aaPredicted RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 TMBIM4Q9HC24 238 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 SEMA4BQ9NPR2 832 aaPredicted RBP6.05□□□□□ -1.44
LTBR-212ENST00000543542 STARD5Q9NSY2 213 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 SEMA5BQ9P283 1151 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 WASF3Q9UPY6 502 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 SH2B3Q9UQQ2 575 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 AP1M2Q9Y6Q5 423 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 SPEGQ15772 3267 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 CEP250Q9BV73 2442 aa6.05□□□□□ -1.44
LTBR-212ENST00000543542 SNRNP200O75643 2136 aaKnown RBP6.04□□□□□ -1.44
LTBR-212ENST00000543542 KIF26BQ2KJY2 2108 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 LOC105369274A0A096LPK9 316 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 IGKV1-8A0A0C4DH67 115 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 LOC102723532A0A0G2JNH3 316 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 TRBC2A0A5B9 178 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 HYKKA2RU49 373 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 WDR91A4D1P6 747 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 URADA6NGE7 173 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 C1QTNF9BB2RNN3 333 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 H0YGG7 62 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ZSCAN9O15535 394 aaPredicted RBP6.04□□□□□ -1.44
LTBR-212ENST00000543542 NDUFS4O43181 175 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ZNF749O43361 778 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 KLK8O60259 260 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 DLX3O60479 287 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 CTSVO60911 334 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 CRCPO75575 148 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 STK17BO94768 372 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 CLDN9O95484 217 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 C1QTNF9P0C862 333 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 CREB1P16220 341 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 TSPAN8P19075 237 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 IMPDH1P20839 514 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 AGXTP21549 392 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 CD82P27701 267 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ARSFP54793 590 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 CDH13P55290 713 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ARF3P61204 181 aaPredicted RBP6.04□□□□□ -1.44
LTBR-212ENST00000543542 HERVK_113P63132 956 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 CYP4F2P78329 520 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 PHEXP78562 749 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 REEP5Q00765 189 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 RGS1Q08116 209 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 DDX39BQ13838 428 aaKnown RBP6.04□□□□□ -1.44
LTBR-212ENST00000543542 COL9A2Q14055 689 aaPredicted RBP6.04□□□□□ -1.44
LTBR-212ENST00000543542 DOC2AQ14183 400 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 NDUFA9Q16795 377 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ZXDCQ2QGD7 858 aaPredicted RBP6.04□□□□□ -1.44
LTBR-212ENST00000543542 TBC1D25Q3MII6 688 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ZNF678Q5SXM1 525 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 AGBL2Q5U5Z8 902 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 PRAMEF17Q5VTA0 474 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 HHATQ5VTY9 493 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 C1orf189Q5VU69 101 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ATG9BQ674R7 924 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ZNF425Q6IV72 752 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 PWWP2BQ6NUJ5 590 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 METTL2BQ6P1Q9 378 aaKnown RBP6.04□□□□□ -1.44
LTBR-212ENST00000543542 MED27Q6P2C8 311 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 FBXO42Q6P3S6 717 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 C6orf15Q6UXA7 325 aaPredicted RBP6.04□□□□□ -1.44
LTBR-212ENST00000543542 TMIGD1Q6UXZ0 262 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ZYG11AQ6WRX3 759 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 TTLL10Q6ZVT0 673 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 RPS27LQ71UM5 84 aaKnown RBP6.04□□□□□ -1.44
LTBR-212ENST00000543542 RNF44Q7L0R7 432 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 MILR1Q7Z6M3 343 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ASPGQ86U10 573 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 C10orf107Q8IVU9 208 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 OR4N4Q8N0Y3 316 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 MFSD9Q8NBP5 474 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 CAMKVQ8NCB2 501 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 GALNT6Q8NCL4 622 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ZNF248Q8NDW4 579 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ABHD11Q8NFV4 315 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 TTLQ8NG68 377 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ZCCHC10Q8TBK6 192 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 MGARPQ8TDB4 240 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 TRPC4APQ8TEL6 797 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 KCNE4Q8WWG9 221 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 SLC13A3Q8WWT9 602 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 FGF11Q92914 225 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 MR1Q95460 341 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 UBE2E3Q969T4 207 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 KIAA1143Q96AT1 154 aaPredicted RBP6.04□□□□□ -1.44
LTBR-212ENST00000543542 REPS1Q96D71 796 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 THAP11Q96EK4 314 aa6.04□□□□□ -1.44
LTBR-212ENST00000543542 ERVK-6Q9BXR3 956 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms