RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 MYO1HQ8N1T3 1032 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 DTWD1Q8N5C7 304 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 NAT8LQ8N9F0 302 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 PPFIBP2Q8ND30 876 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 METTL21AQ8WXB1 218 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 C8orf44Q96CB5 159 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 THAP11Q96EK4 314 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 CCDC138Q96M89 665 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 SLC30A3Q99726 388 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 AARSD1Q9BTE6 412 aaKnown RBP12.47□□□□□ -0.41
RTN3-212ENST00000543123 TMEM184CQ9NVA4 438 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 MED16Q9Y2X0 877 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 NEU2Q9Y3R4 380 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 NOTCH2Q04721 2471 aa12.47□□□□□ -0.41
RTN3-212ENST00000543123 CENPEQ02224 2701 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 A0A0A6YYC8 382 aaPredicted RBP12.46□□□□□ -0.41
RTN3-212ENST00000543123 H0YIG0 161 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 I3L1I5 382 aaPredicted RBP12.46□□□□□ -0.41
RTN3-212ENST00000543123 HAT1O14929 419 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 ZSCAN12O43309 604 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 WFS1O76024 890 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 BMP10O95393 424 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 PRR35P0CG20 571 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 MYBL2P10244 700 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 EDN3P14138 238 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 IMPA1P29218 277 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 TBPL1P62380 186 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 Q0VFX4 171 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 CRYMQ14894 314 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 RPUSD3Q6P087 351 aaKnown RBP12.46□□□□□ -0.41
RTN3-212ENST00000543123 KIAA0408Q6ZU52 694 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 PIWIL4Q7Z3Z4 852 aaKnown RBP12.46□□□□□ -0.41
RTN3-212ENST00000543123 BCORP1Q8N888 145 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 AMER3Q8N944 861 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 SIGLEC10Q96LC7 697 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 OSBPL9Q96SU4 736 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 IARS2Q9NSE4 1012 aaKnown RBP12.46□□□□□ -0.41
RTN3-212ENST00000543123 STOX2Q9P2F5 926 aaPredicted RBP12.46□□□□□ -0.41
RTN3-212ENST00000543123 C19orf25Q9UFG5 118 aaPredicted RBP12.46□□□□□ -0.41
RTN3-212ENST00000543123 ASIC3Q9UHC3 531 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 TEKT2Q9UIF3 430 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 ERRFI1Q9UJM3 462 aaPredicted RBP12.46□□□□□ -0.41
RTN3-212ENST00000543123 MKL2Q9ULH7 1088 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 MRPS2Q9Y399 296 aaKnown RBP12.46□□□□□ -0.41
RTN3-212ENST00000543123 CSAG2Q9Y5P2 127 aa12.46□□□□□ -0.41
RTN3-212ENST00000543123 DOCK10Q96BY6 2186 aa12.46□□□□□ -0.42
RTN3-212ENST00000543123 HEATR5BQ9P2D3 2071 aa12.46□□□□□ -0.42
RTN3-212ENST00000543123 CNTRLQ7Z7A1 2325 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 KCNE1BA0A087WTH5 132 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 IGHV1-45A0A0A0MS14 117 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 TRAV17A0A0B4J275 112 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 A1L4Q6 167 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 WIPF3A6NGB9 483 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 H7BY64 318 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 SLC16A5O15375 505 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 HAUS5O94927 633 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 LDLRP01130 860 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 HIST1H2AGP0C0S8 130 aaPredicted RBP12.45□□□□□ -0.42
RTN3-212ENST00000543123 C8orf89P0DMQ9 161 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 HIST1H2ADP20671 130 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 SKP1P63208 163 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 MPP1Q00013 466 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 EEF1A2Q05639 463 aaKnown RBP12.45□□□□□ -0.42
RTN3-212ENST00000543123 KCTD19Q17RG1 926 aaPredicted RBP12.45□□□□□ -0.42
RTN3-212ENST00000543123 SPANXN3Q5MJ09 141 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 RNASEH2BQ5TBB1 312 aaKnown RBP12.45□□□□□ -0.42
RTN3-212ENST00000543123 CYHR1Q6ZMK1 362 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 LAPTM4BQ86VI4 370 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 C17orf64Q86WR6 236 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 ZC3H7AQ8IWR0 971 aaKnown RBP12.45□□□□□ -0.42
RTN3-212ENST00000543123 LRRC56Q8IYG6 542 aaPredicted RBP12.45□□□□□ -0.42
RTN3-212ENST00000543123 TBC1D19Q8N5T2 526 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 CAMKVQ8NCB2 501 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 C2CD4AQ8NCU7 369 aaPredicted RBP12.45□□□□□ -0.42
RTN3-212ENST00000543123 SUN3Q8TAQ9 357 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 BRIX1Q8TDN6 353 aaKnown RBP12.45□□□□□ -0.42
RTN3-212ENST00000543123 GRHL3Q8TE85 626 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 FAR1Q8WVX9 515 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 HIST1H2AHQ96KK5 128 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 PRAP1Q96NZ9 151 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 HIST1H2AJQ99878 128 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 H2AFJQ9BTM1 129 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 TUBB6Q9BUF5 446 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 ZNF700Q9H0M5 742 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 PARVBQ9HBI1 364 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 PTGFRNQ9P2B2 879 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 CORO1CQ9ULV4 474 aaPredicted RBP12.45□□□□□ -0.42
RTN3-212ENST00000543123 NTNG1Q9Y2I2 539 aa12.45□□□□□ -0.42
RTN3-212ENST00000543123 LOC102723996A0A087X1L8 192 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 P2RX6O15547 441 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 FOXS1O43638 330 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 NSA2O95478 260 aaKnown RBP12.44□□□□□ -0.42
RTN3-212ENST00000543123 SLC35G6P0C7Q6 338 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 SOX11P35716 441 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 MFSD4BQ5TF39 518 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 FAAH2Q6GMR7 532 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 GALNT7Q86SF2 657 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 PLD3Q8IV08 490 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 ARHGEF39Q8N4T4 335 aa12.44□□□□□ -0.42
RTN3-212ENST00000543123 OR1N1Q8NGS0 311 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms