RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 C10orf62Q5T681 223 aaPredicted RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 INTS5Q6P9B9 1019 aaKnown RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 B3GNT9Q6UX72 402 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 HSDL2Q6YN16 418 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 DDX53Q86TM3 631 aaKnown RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 SPATA6LQ8N4H0 392 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 EIF4E3Q8N5X7 224 aaKnown RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 DPP10Q8N608 796 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF655Q8N720 491 aaPredicted RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 BVESQ8NE79 360 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 DCAF4Q8WV16 495 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 TWIST2Q8WVJ9 160 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 TFAP2BQ92481 460 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 OTULINQ96BN8 352 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 TBC1D20Q96BZ9 403 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 PHF21BQ96EK2 531 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 OR5M11Q96RB7 305 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 KCTD15Q96SI1 283 aaPredicted RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 MGLLQ99685 303 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 NTPCRQ9BSD7 190 aaKnown RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 BARHL1Q9BZE3 327 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 PRDM12Q9H4Q4 367 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 GSTO2Q9H4Y5 243 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF768Q9H5H4 540 aaKnown RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 SNTG1Q9NSN8 517 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 UFSP2Q9NUQ7 469 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 MPP6Q9NZW5 540 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 SLAMF8Q9P0V8 285 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 SEC14L4Q9UDX3 406 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 TJP2Q9UDY2 1190 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 A0A1B0GTQ1 180 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 FAM95CA0A1B0GW59 222 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 ASPDHA6ND91 283 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 PIP5K1BO14986 540 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 CCNDBP1O95273 360 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 IL6P05231 212 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 CNPP09543 421 aaKnown RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 FAM157BP0CG42 384 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 RAB3BP20337 219 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 DNASE1P24855 282 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 SSTR2P30874 369 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 MAN2A2P49641 1150 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 PGDP52209 483 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 RPL6Q02878 288 aaKnown RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 NKG7Q16617 165 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 TECRLQ5HYJ1 363 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC25A25Q6KCM7 469 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 PHYKPLQ8IUZ5 450 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 MCATQ8IVS2 390 aaKnown RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 NKAIN4Q8IVV8 208 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 MICALL2Q8IY33 904 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 ENTHD1Q8IYW4 607 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 Q8N402 240 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 DNAJC22Q8N4W6 341 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 C12orf45Q8N5I9 185 aaPredicted RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 OR11H4Q8NGC9 324 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 RHBDF1Q96CC6 855 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 ZBED6CLQ96FA7 236 aaPredicted RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 GMCL1Q96IK5 515 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 PITX2Q99697 317 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 PAPOLGQ9BWT3 736 aaKnown RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 CARS2Q9HA77 564 aaKnown RBP8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 NIT2Q9NQR4 276 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 GPATCH2LQ9NWQ4 482 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 SPHK1Q9NYA1 384 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC45A1Q9Y2W3 748 aa8.28□□□□□ -1.08
SRGAP1-202ENST00000537556 CITO14578 2027 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 A0A1B0GWJ7 208 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 A0A1W2PQL4 384 aaPredicted RBP8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 FAM234BA2RU67 622 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 C19orf81C9J6K1 198 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 FZD9O00144 591 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 QSOX1O00391 747 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 UBFD1O14562 309 aaKnown RBP8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 AZIN1O14977 448 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 ADAM12O43184 909 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 PLOD3O60568 738 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 CLN5O75503 358 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 CCNB2O95067 398 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 LGI1O95970 557 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 PTHP01270 115 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 LTA4HP09960 611 aaKnown RBP8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 IL1RNP18510 177 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 PTGER2P43116 358 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 PREPP48147 710 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 DAPP51397 102 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 CLCN7P51798 805 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 CAPZA1P52907 286 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 MED22Q15528 200 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 TSTQ16762 297 aaKnown RBP8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 PFKFB4Q16877 469 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 CD276Q5ZPR3 534 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 OR7E24Q6IFN5 339 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 ASPGQ86U10 573 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 CLEC10AQ8IUN9 316 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 STPG2Q8N412 459 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 OR8J3Q8NGG0 315 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 ELP5Q8TE02 316 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 GGHQ92820 318 aa8.27□□□□□ -1.09
SRGAP1-202ENST00000537556 UCN3Q969E3 161 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms