RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 PTERQ96BW5 349 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 CABS1Q96KC9 395 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 TSNARE1Q96NA8 513 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 SPSB2Q99619 263 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 C17orf62Q9BQA9 187 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 MESP1Q9BRJ9 268 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 TRIM54Q9BYV2 358 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 FAM117AQ9C073 453 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 DERL2Q9GZP9 239 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 ADNPQ9H2P0 1102 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 CDC42EP4Q9H3Q1 356 aaKnown RBP12.54□□□□□ -0.4
PRKDC-206ENST00000536429 SOX17Q9H6I2 414 aaPredicted RBP12.54□□□□□ -0.4
PRKDC-206ENST00000536429 PADI2Q9Y2J8 665 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 NCF1BA6NI72 391 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-206ENST00000536429 NCF1CA8MVU1 366 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-206ENST00000536429 B8ZZF3 427 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 RFPL1O75677 317 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 ACSL3O95573 720 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 SLC35E2BP0CK96 405 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 NCF1P14598 390 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-206ENST00000536429 STMN1P16949 149 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 CCND1P24385 295 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 SPRP35270 261 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-206ENST00000536429 FOLR3P41439 243 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 GDF5P43026 501 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 KCNC1P48547 511 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 CCL11P51671 97 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 RAB10P61026 200 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 CSHL1Q14406 222 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 NKG7Q16617 165 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 MUM1Q2TAK8 710 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 GLE1Q53GS7 698 aaKnown RBP12.53□□□□□ -0.4
PRKDC-206ENST00000536429 ADAMTSL2Q86TH1 951 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 RELL1Q8IUW5 271 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 APLFQ8IW19 511 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-206ENST00000536429 PRSS58Q8IYP2 241 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 ZNF740Q8NDX6 193 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 ABHD11Q8NFV4 315 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 C9orf43Q8TAL5 461 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-206ENST00000536429 ATL1Q8WXF7 558 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 ANKRD7Q92527 254 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 NEIL2Q969S2 332 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 RERGQ96A58 199 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-206ENST00000536429 COL26A1Q96A83 441 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 FKBP10Q96AY3 582 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 TSPAN17Q96FV3 270 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 UBXN10Q96LJ8 280 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 FMO2Q99518 471 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 HAUS8Q9BT25 410 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 ING2Q9H160 280 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 MTRF1LQ9UGC7 380 aaKnown RBP12.53□□□□□ -0.4
PRKDC-206ENST00000536429 TUBD1Q9UJT1 453 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 SLC22A14Q9Y267 594 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 TP53TG5Q9Y2B4 290 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 HEATR5BQ9P2D3 2071 aa12.53□□□□□ -0.4
PRKDC-206ENST00000536429 HELZ2Q9BYK8 2649 aaKnown RBP12.53□□□□□ -0.4
PRKDC-206ENST00000536429 ANKRD12Q6UB98 2062 aa12.52□□□□□ -0.4
PRKDC-206ENST00000536429 MED13Q9UHV7 2174 aa12.52□□□□□ -0.4
PRKDC-206ENST00000536429 KCNE1BA0A087WTH5 132 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 A0A0A6YYC8 382 aaPredicted RBP12.52□□□□□ -0.41
PRKDC-206ENST00000536429 PABPN1LA6NDY0 278 aaKnown RBP12.52□□□□□ -0.41
PRKDC-206ENST00000536429 VSTM2BA6NLU5 285 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 PYCARD-AS1I3L0S3 204 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 I3L1I5 382 aaPredicted RBP12.52□□□□□ -0.41
PRKDC-206ENST00000536429 TAPBPO15533 448 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 ALBP02768 609 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 HRH2P25021 359 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 SLC6A12P48065 614 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 RPS15AP62244 130 aaKnown RBP12.52□□□□□ -0.41
PRKDC-206ENST00000536429 MAT1AQ00266 395 aaKnown RBP12.52□□□□□ -0.41
PRKDC-206ENST00000536429 CDKL1Q00532 357 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 IRF9Q00978 393 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 NAB1Q13506 487 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 SSPNQ14714 243 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 TGFBIQ15582 683 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 SYT16Q17RD7 645 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 VWA2Q5GFL6 755 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 MROH9Q5TGP6 573 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 FRA10AC1Q70Z53 315 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 PRSS41Q7RTY9 318 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 THOC6Q86W42 341 aaKnown RBP12.52□□□□□ -0.41
PRKDC-206ENST00000536429 CEP112Q8N8E3 955 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 AMER3Q8N944 861 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 OR4K1Q8NGD4 311 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 UHMK1Q8TAS1 419 aaKnown RBP12.52□□□□□ -0.41
PRKDC-206ENST00000536429 SLC5A11Q8WWX8 675 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 ESAMQ96AP7 390 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 RHBDF1Q96CC6 855 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 MOCOSQ96EN8 888 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 EGFL8Q99944 293 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 TMEM79Q9BSE2 394 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 SLC26A1Q9H2B4 701 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 ZNF304Q9HCX3 659 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 IGSF5Q9NSI5 407 aa12.52□□□□□ -0.41
PRKDC-206ENST00000536429 A6NL46 340 aa12.51□□□□□ -0.41
PRKDC-206ENST00000536429 ALOX12BO75342 701 aa12.51□□□□□ -0.41
PRKDC-206ENST00000536429 ANXA5P08758 320 aa12.51□□□□□ -0.41
PRKDC-206ENST00000536429 RHOXF2BP0C7M4 288 aa12.51□□□□□ -0.41
PRKDC-206ENST00000536429 SFTPCP11686 197 aa12.51□□□□□ -0.41
PRKDC-206ENST00000536429 PLA2G2AP14555 144 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms