RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 YBX1P67809 324 aaKnown RBP12.47□□□□□ -0.41
RTN3-207ENST00000536011 ARG2P78540 354 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 SP140Q13342 867 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 INAQ16352 499 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 HSP90AA5PQ58FG0 334 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 VWA2Q5GFL6 755 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 ZNF549Q6P9A3 640 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 FAM180AQ6UWF9 173 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 LINC00696Q6ZRV3 163 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 MAMDC2Q7Z304 686 aaPredicted RBP12.47□□□□□ -0.41
RTN3-207ENST00000536011 PCGF5Q86SE9 256 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 CPNE9Q8IYJ1 553 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 MYO1HQ8N1T3 1032 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 DTWD1Q8N5C7 304 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 NAT8LQ8N9F0 302 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 PPFIBP2Q8ND30 876 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 METTL21AQ8WXB1 218 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 C8orf44Q96CB5 159 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 THAP11Q96EK4 314 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 CCDC138Q96M89 665 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 SLC30A3Q99726 388 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 AARSD1Q9BTE6 412 aaKnown RBP12.47□□□□□ -0.41
RTN3-207ENST00000536011 TMEM184CQ9NVA4 438 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 MED16Q9Y2X0 877 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 NEU2Q9Y3R4 380 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 NOTCH2Q04721 2471 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 CENPEQ02224 2701 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 A0A0A6YYC8 382 aaPredicted RBP12.46□□□□□ -0.41
RTN3-207ENST00000536011 H0YIG0 161 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 I3L1I5 382 aaPredicted RBP12.46□□□□□ -0.41
RTN3-207ENST00000536011 HAT1O14929 419 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 ZSCAN12O43309 604 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 WFS1O76024 890 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 BMP10O95393 424 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 PRR35P0CG20 571 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 MYBL2P10244 700 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 EDN3P14138 238 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 IMPA1P29218 277 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 TBPL1P62380 186 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 Q0VFX4 171 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 CRYMQ14894 314 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 RPUSD3Q6P087 351 aaKnown RBP12.46□□□□□ -0.41
RTN3-207ENST00000536011 KIAA0408Q6ZU52 694 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 PIWIL4Q7Z3Z4 852 aaKnown RBP12.46□□□□□ -0.41
RTN3-207ENST00000536011 BCORP1Q8N888 145 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 AMER3Q8N944 861 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 SIGLEC10Q96LC7 697 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 OSBPL9Q96SU4 736 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 IARS2Q9NSE4 1012 aaKnown RBP12.46□□□□□ -0.41
RTN3-207ENST00000536011 STOX2Q9P2F5 926 aaPredicted RBP12.46□□□□□ -0.41
RTN3-207ENST00000536011 C19orf25Q9UFG5 118 aaPredicted RBP12.46□□□□□ -0.41
RTN3-207ENST00000536011 ASIC3Q9UHC3 531 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 TEKT2Q9UIF3 430 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 ERRFI1Q9UJM3 462 aaPredicted RBP12.46□□□□□ -0.41
RTN3-207ENST00000536011 MKL2Q9ULH7 1088 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 MRPS2Q9Y399 296 aaKnown RBP12.46□□□□□ -0.41
RTN3-207ENST00000536011 BOLA1Q9Y3E2 137 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 CSAG2Q9Y5P2 127 aa12.46□□□□□ -0.41
RTN3-207ENST00000536011 DOCK10Q96BY6 2186 aa12.46□□□□□ -0.42
RTN3-207ENST00000536011 HEATR5BQ9P2D3 2071 aa12.46□□□□□ -0.42
RTN3-207ENST00000536011 CNTRLQ7Z7A1 2325 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 KCNE1BA0A087WTH5 132 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 IGHV1-45A0A0A0MS14 117 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 TRAV17A0A0B4J275 112 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 A1L4Q6 167 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 WIPF3A6NGB9 483 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 H7BY64 318 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 SLC16A5O15375 505 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 HAUS5O94927 633 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 LDLRP01130 860 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 HIST1H2AGP0C0S8 130 aaPredicted RBP12.45□□□□□ -0.42
RTN3-207ENST00000536011 C8orf89P0DMQ9 161 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 HIST1H2ADP20671 130 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 SKP1P63208 163 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 MPP1Q00013 466 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 EEF1A2Q05639 463 aaKnown RBP12.45□□□□□ -0.42
RTN3-207ENST00000536011 KCTD19Q17RG1 926 aaPredicted RBP12.45□□□□□ -0.42
RTN3-207ENST00000536011 SPANXN3Q5MJ09 141 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 RNASEH2BQ5TBB1 312 aaKnown RBP12.45□□□□□ -0.42
RTN3-207ENST00000536011 CYHR1Q6ZMK1 362 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 LAPTM4BQ86VI4 370 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 C17orf64Q86WR6 236 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 ZC3H7AQ8IWR0 971 aaKnown RBP12.45□□□□□ -0.42
RTN3-207ENST00000536011 LRRC56Q8IYG6 542 aaPredicted RBP12.45□□□□□ -0.42
RTN3-207ENST00000536011 TBC1D19Q8N5T2 526 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 CAMKVQ8NCB2 501 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 C2CD4AQ8NCU7 369 aaPredicted RBP12.45□□□□□ -0.42
RTN3-207ENST00000536011 SUN3Q8TAQ9 357 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 BRIX1Q8TDN6 353 aaKnown RBP12.45□□□□□ -0.42
RTN3-207ENST00000536011 GRHL3Q8TE85 626 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 FAR1Q8WVX9 515 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 MARVELD3Q96A59 401 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 HIST1H2AHQ96KK5 128 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 PRAP1Q96NZ9 151 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 HIST1H2AJQ99878 128 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 H2AFJQ9BTM1 129 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 TUBB6Q9BUF5 446 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 ZNF700Q9H0M5 742 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 PARVBQ9HBI1 364 aa12.45□□□□□ -0.42
RTN3-207ENST00000536011 PTGFRNQ9P2B2 879 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms