RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 DCUN1D3Q8IWE4 304 aa27.43■■□□□ 1.98
SAMD1-202ENST00000533683 C2orf73Q8N5S3 287 aaPredicted RBP27.43■■□□□ 1.98
SAMD1-202ENST00000533683 KLK6Q92876 244 aa27.43■■□□□ 1.98
SAMD1-202ENST00000533683 LIMD1Q9UGP4 676 aa27.43■■□□□ 1.98
SAMD1-202ENST00000533683 ERVK-11Q9UQG0 969 aa27.43■■□□□ 1.98
SAMD1-202ENST00000533683 TDRKHQ9Y2W6 561 aaKnown RBP27.43■■□□□ 1.98
SAMD1-202ENST00000533683 FOXE1O00358 373 aaPredicted RBP27.42■■□□□ 1.98
SAMD1-202ENST00000533683 LAMP1P11279 417 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 TRIM23P36406 574 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 CHRNB3Q05901 458 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 SLC14A1Q13336 389 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 MAP7Q14244 749 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 OR52E4Q8NGH9 312 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 FBXO30Q8TB52 745 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 SETD7Q8WTS6 366 aaKnown RBP27.42■■□□□ 1.98
SAMD1-202ENST00000533683 PANX1Q96RD7 426 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 MKRN2Q9H000 416 aaKnown RBP27.42■■□□□ 1.98
SAMD1-202ENST00000533683 WDR26Q9H7D7 661 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 FAM120CQ9NX05 1096 aaKnown RBP27.42■■□□□ 1.98
SAMD1-202ENST00000533683 CFAP20Q9Y6A4 193 aaKnown RBP27.42■■□□□ 1.98
SAMD1-202ENST00000533683 FPGTO14772 594 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 SCAMP2O15127 329 aaKnown RBP27.42■■□□□ 1.98
SAMD1-202ENST00000533683 YY2O15391 372 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 SMIM18P0DKX4 95 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 ASMTP46597 345 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 IYDQ6PHW0 289 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 ZNF551Q7Z340 670 aaPredicted RBP27.42■■□□□ 1.98
SAMD1-202ENST00000533683 TFAP2CQ92754 450 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 FAM162AQ96A26 154 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 DMRT3Q9NQL9 472 aa27.42■■□□□ 1.98
SAMD1-202ENST00000533683 DNMT3AQ9Y6K1 912 aaPredicted RBP27.42■■□□□ 1.98
SAMD1-202ENST00000533683 TICRRQ7Z2Z1 1910 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 CLOCKO15516 846 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 TNFAIP8O95379 198 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 C1QCP02747 245 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 MYCLP1P12525 358 aaPredicted RBP27.41■■□□□ 1.98
SAMD1-202ENST00000533683 TIA1P31483 386 aaKnown RBP eCLIP27.41■■□□□ 1.988e-13■□□□□ 10
SAMD1-202ENST00000533683 HIST2H2ACQ16777 129 aaPredicted RBP27.41■■□□□ 1.98
SAMD1-202ENST00000533683 HKDC1Q2TB90 917 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 PRAMEF14Q5SWL7 426 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 C10orf62Q5T681 223 aaPredicted RBP27.41■■□□□ 1.98
SAMD1-202ENST00000533683 PRAMEF13Q5VWM6 474 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 HIST2H2AA3Q6FI13 130 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 TP53I13Q8NBR0 393 aaPredicted RBP27.41■■□□□ 1.98
SAMD1-202ENST00000533683 VPS50Q96JG6 964 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 NRTNQ99748 197 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 BDH2Q9BUT1 245 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 UGT2B28Q9BY64 529 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 GABRR3A8MPY1 467 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 ABHD18Q0P651 414 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 NKG7Q16617 165 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 GALNT18Q6P9A2 607 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 OR5K2Q8NHB8 316 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 STARD8Q92502 1023 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 ANKRD60Q9BZ19 345 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 ZNF696Q9H7X3 374 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 NTN4Q9HB63 628 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 FBXL12Q9NXK8 326 aa27.41■■□□□ 1.98
SAMD1-202ENST00000533683 GNG14A0A1W2PPG7 69 aa27.4■■□□□ 1.98
SAMD1-202ENST00000533683 PRR23AA6NEV1 266 aa27.4■■□□□ 1.98
SAMD1-202ENST00000533683 EI24O14681 340 aa27.4■■□□□ 1.98
SAMD1-202ENST00000533683 KMOO15229 486 aa27.4■■□□□ 1.98
SAMD1-202ENST00000533683 CREG1O75629 220 aa27.4■■□□□ 1.98
SAMD1-202ENST00000533683 CLECL1Q8IZS7 167 aa27.4■■□□□ 1.98
SAMD1-202ENST00000533683 ZNF740Q8NDX6 193 aa27.4■■□□□ 1.98
SAMD1-202ENST00000533683 REXO5Q96IC2 774 aaKnown RBP27.4■■□□□ 1.98
SAMD1-202ENST00000533683 C8orf4Q9NR00 106 aa27.4■■□□□ 1.98
SAMD1-202ENST00000533683 ZNF639Q9UID6 485 aa27.4■■□□□ 1.98
SAMD1-202ENST00000533683 PLOD2O00469 737 aa27.39■■□□□ 1.98
SAMD1-202ENST00000533683 PCDH7O60245 1069 aa27.39■■□□□ 1.98
SAMD1-202ENST00000533683 TGFB1P01137 390 aa27.39■■□□□ 1.98
SAMD1-202ENST00000533683 RETP07949 1114 aa27.39■■□□□ 1.98
SAMD1-202ENST00000533683 RPL10P27635 214 aaKnown RBP27.39■■□□□ 1.98
SAMD1-202ENST00000533683 LCTLQ6UWM7 567 aa27.39■■□□□ 1.98
SAMD1-202ENST00000533683 ARMCX6Q7L4S7 300 aa27.39■■□□□ 1.98
SAMD1-202ENST00000533683 NETO1Q8TDF5 533 aa27.39■■□□□ 1.98
SAMD1-202ENST00000533683 GANCQ8TET4 914 aa27.39■■□□□ 1.98
SAMD1-202ENST00000533683 NCLNQ969V3 563 aa27.39■■□□□ 1.98
SAMD1-202ENST00000533683 RIPOR3Q96MK2 946 aa27.39■■□□□ 1.98
SAMD1-202ENST00000533683 DUSP26Q9BV47 211 aa27.39■■□□□ 1.98
SAMD1-202ENST00000533683 DCAF13Q9NV06 445 aaKnown RBP27.39■■□□□ 1.98
SAMD1-202ENST00000533683 EME2A4GXA9 379 aaPredicted RBP27.39■■□□□ 1.97
SAMD1-202ENST00000533683 FUCA1P04066 466 aa27.39■■□□□ 1.97
SAMD1-202ENST00000533683 TEAD1P28347 426 aa27.39■■□□□ 1.97
SAMD1-202ENST00000533683 CLCN2P51788 898 aa27.39■■□□□ 1.97
SAMD1-202ENST00000533683 LAPTM5Q13571 262 aa27.39■■□□□ 1.97
SAMD1-202ENST00000533683 PON2Q15165 354 aa27.39■■□□□ 1.97
SAMD1-202ENST00000533683 TMEM196Q5HYL7 178 aa27.39■■□□□ 1.97
SAMD1-202ENST00000533683 ZNF621Q6ZSS3 439 aa27.39■■□□□ 1.97
SAMD1-202ENST00000533683 SH3KBP1Q96B97 665 aa27.39■■□□□ 1.97
SAMD1-202ENST00000533683 SLC6A17Q9H1V8 727 aa27.39■■□□□ 1.97
SAMD1-202ENST00000533683 OR51B5Q9H339 312 aa27.39■■□□□ 1.97
SAMD1-202ENST00000533683 F5P12259 2224 aa27.39■■□□□ 1.97
SAMD1-202ENST00000533683 MYOCOSA0A1B0GUC4 107 aa27.38■■□□□ 1.97
SAMD1-202ENST00000533683 CLIC1O00299 241 aa27.38■■□□□ 1.97
SAMD1-202ENST00000533683 UPK1AO00322 258 aa27.38■■□□□ 1.97
SAMD1-202ENST00000533683 DEAF1O75398 565 aaPredicted RBP27.38■■□□□ 1.97
SAMD1-202ENST00000533683 PRSS23O95084 383 aa27.38■■□□□ 1.97
SAMD1-202ENST00000533683 ERGP11308 486 aa27.38■■□□□ 1.97
SAMD1-202ENST00000533683 CPTPQ5TA50 214 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms