RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 SLC13A3Q8WWT9 602 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 CPT1BQ92523 772 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 RSC1A1Q92681 617 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 AZIN2Q96A70 460 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 ADAM2Q99965 735 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 TMEM109Q9BVC6 243 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 PCDHAC1Q9H158 963 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 SEMA6BQ9H3T3 888 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 PATZ1Q9HBE1 687 aaKnown RBP7.92□□□□□ -1.14
CTNND1-231ENST00000532463 CNOT11Q9UKZ1 510 aaKnown RBP7.92□□□□□ -1.14
CTNND1-231ENST00000532463 TP53TG5Q9Y2B4 290 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 COLEC10Q9Y6Z7 277 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 TSPOAP1O95153 1857 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 CARNS1A5YM72 827 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 AGPSO00116 658 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 ZBTB7AO95365 584 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 FRKP42685 505 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-231ENST00000532463 CX3CR1P49238 355 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 THBS3P49746 956 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 CLCN3P51790 818 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 NFKB2Q00653 900 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 FAM83FQ8NEG4 500 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-231ENST00000532463 TMEM185AQ8NFB2 350 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 OR4Q3Q8NH05 313 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 FAM110BQ8TC76 370 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 SLC2A14Q8TDB8 520 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 HAS2Q92819 552 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 SPIN2AQ99865 258 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 SPIN2BQ9BPZ2 258 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 FAM83CQ9BQN1 747 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 ZNF559Q9BR84 538 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 NUSAP1Q9BXS6 441 aaKnown RBP7.92□□□□□ -1.14
CTNND1-231ENST00000532463 MIR1-1HGQ9H1L0 117 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 ELP3Q9H9T3 547 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 ST14Q9Y5Y6 855 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 CLCA3PQ9Y6N3 262 aa7.92□□□□□ -1.14
CTNND1-231ENST00000532463 A0A1W2PS29 197 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 SUPT20HL2P0C7V6 817 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 ALAS2P22557 587 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 LTKP29376 864 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 ASPAP45381 313 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 LSSP48449 732 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 TAS2R30P59541 319 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 ACTA2P62736 377 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 ACTG2P63267 376 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 ACTC1P68032 377 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 ACTA1P68133 377 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 SNTB2Q13425 540 aaKnown RBP7.91□□□□□ -1.14
CTNND1-231ENST00000532463 IRF5Q13568 498 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 CDKAL1Q5VV42 579 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 PDE12Q6L8Q7 609 aaKnown RBP7.91□□□□□ -1.14
CTNND1-231ENST00000532463 ANKRD54Q6NXT1 300 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 TMEM205Q6UW68 189 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 XKR5Q6UX68 686 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 P4HA3Q7Z4N8 544 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 GALNT10Q86SR1 603 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 SVBPQ8N300 66 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 GPRC5AQ8NFJ5 357 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 KCNC2Q96PR1 638 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 MTFR1LQ9H019 292 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 SDHAF3Q9NRP4 125 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 MAN2C1Q9NTJ4 1040 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 TXNL4BQ9NX01 149 aaKnown RBP7.91□□□□□ -1.14
CTNND1-231ENST00000532463 ADAM18Q9Y3Q7 739 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 PTCH2Q9Y6C5 1203 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 M0R2N6 131 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 C2P06681 752 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 SNRNP70P08621 437 aaKnown RBP7.91□□□□□ -1.14
CTNND1-231ENST00000532463 CXCL8P10145 99 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 IDSP22304 550 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 CHRNA4P43681 627 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 VSX2P58304 361 aaPredicted RBP7.91□□□□□ -1.14
CTNND1-231ENST00000532463 UPP1Q16831 310 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 PDSS1Q5T2R2 415 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 FIGNL1Q6PIW4 674 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 NAPRTQ6XQN6 538 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 CMC1Q7Z7K0 106 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 S100A7AQ86SG5 101 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 RASGRP3Q8IV61 690 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 TMEM86AQ8N2M4 240 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 ZBTB2Q8N680 514 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 GPR151Q8TDV0 419 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 GEMIN6Q8WXD5 167 aaKnown RBP7.91□□□□□ -1.14
CTNND1-231ENST00000532463 GLYATL1Q969I3 302 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 LRCH3Q96II8 777 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 RNF157Q96PX1 679 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 HINT2Q9BX68 163 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 RUVBL1Q9Y265 456 aaKnown RBP7.91□□□□□ -1.14
CTNND1-231ENST00000532463 SIGLEC16A6NMB1 481 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 SEC14L6B5MCN3 397 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 PRKYO43930 277 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 CIDEAO60543 219 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 VIPP01282 170 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 H1F0P07305 194 aaKnown RBP7.91□□□□□ -1.14
CTNND1-231ENST00000532463 RETP07949 1114 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 ELFN1P0C7U0 828 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 AVPR1BP47901 424 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 SOX9P48436 509 aa7.91□□□□□ -1.14
CTNND1-231ENST00000532463 EEFSECP57772 596 aaKnown RBP7.91□□□□□ -1.14
CTNND1-231ENST00000532463 RAB8AP61006 207 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms