RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 HRH2P25021 359 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 SOX11P35716 441 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 FNTAP49354 379 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 EEF1A2Q05639 463 aaKnown RBP15.97■□□□□ 0.15
CPSF1-207ENST00000531727 NDUFA9Q16795 377 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 HSP90AA5PQ58FG0 334 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 FAAH2Q6GMR7 532 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 LRRC8EQ6NSJ5 796 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 RPUSD3Q6P087 351 aaKnown RBP15.97■□□□□ 0.15
CPSF1-207ENST00000531727 PPIL6Q8IXY8 311 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 CATSPER1Q8NEC5 780 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 FAR1Q8WVX9 515 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 PSMF1Q92530 271 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 CCDC177Q9NQR7 707 aaPredicted RBP15.97■□□□□ 0.15
CPSF1-207ENST00000531727 PTGFRNQ9P2B2 879 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 HIVEP3Q5T1R4 2406 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 LOC102723996A0A087X1L8 192 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 H7BY64 318 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 BMP10O95393 424 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 EDN3P14138 238 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 PTK6Q13882 451 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 SYT16Q17RD7 645 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 RNASEH2BQ5TBB1 312 aaKnown RBP15.96■□□□□ 0.15
CPSF1-207ENST00000531727 UGT3A1Q6NUS8 523 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 TMEM205Q6UW68 189 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 ZC3H7AQ8IWR0 971 aaKnown RBP15.96■□□□□ 0.15
CPSF1-207ENST00000531727 ACTRT1Q8TDG2 376 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 BRIX1Q8TDN6 353 aaKnown RBP15.96■□□□□ 0.15
CPSF1-207ENST00000531727 PRAP1Q96NZ9 151 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 ZNF700Q9H0M5 742 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 IARS2Q9NSE4 1012 aaKnown RBP15.96■□□□□ 0.15
CPSF1-207ENST00000531727 TMEM184CQ9NVA4 438 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 RIC8BQ9NVN3 520 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 TRMT6Q9UJA5 497 aaKnown RBP15.96■□□□□ 0.15
CPSF1-207ENST00000531727 MKL2Q9ULH7 1088 aa15.96■□□□□ 0.15
CPSF1-207ENST00000531727 MRPS2Q9Y399 296 aaKnown RBP15.96■□□□□ 0.15
CPSF1-207ENST00000531727 SPTBN1Q01082 2364 aaKnown RBP15.95■□□□□ 0.14
CPSF1-207ENST00000531727 GOLGA6L10A0A0M3HER8 536 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 DYTNA2CJ06 578 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 H0YIG0 161 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 PGAM1P18669 254 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 AVPR1BP47901 424 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 RPS15AP62244 130 aaKnown RBP15.95■□□□□ 0.14
CPSF1-207ENST00000531727 TBPL1P62380 186 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 ARG2P78540 354 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 MAT1AQ00266 395 aaKnown RBP15.95■□□□□ 0.14
CPSF1-207ENST00000531727 TIAL1Q01085 375 aaKnown RBP eCLIP15.95■□□□□ 0.14
CPSF1-207ENST00000531727 CRYMQ14894 314 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 PCOLCEQ15113 449 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 FAM180AQ6UWF9 173 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 RIPOR1Q6ZS17 1223 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 C2CD4AQ8NCU7 369 aaPredicted RBP15.95■□□□□ 0.14
CPSF1-207ENST00000531727 OR1N1Q8NGS0 311 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 MCOLN3Q8TDD5 553 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 EEF1AKMT1Q8WVE0 214 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 CCDC138Q96M89 665 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 OSBPL9Q96SU4 736 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 PCBD2Q9H0N5 130 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 ADAMTS6Q9UKP5 1117 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 CPAMD8Q8IZJ3 1885 aa15.95■□□□□ 0.14
CPSF1-207ENST00000531727 KCNE1BA0A087WTH5 132 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 NSA2O95478 260 aaKnown RBP15.94■□□□□ 0.14
CPSF1-207ENST00000531727 STATHP02808 62 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 C8GP07360 202 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 CELA2AP08217 269 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 RGS4P49798 205 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 TNFSF10P50591 281 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 EFNA3P52797 238 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 AP2B1P63010 937 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 SNRPNP63162 240 aaKnown RBP15.94■□□□□ 0.14
CPSF1-207ENST00000531727 PPP1R7Q15435 360 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 VN1R4Q7Z5H5 301 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 SLC35F6Q8N357 371 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 SIRT6Q8N6T7 355 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 BCORP1Q8N888 145 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 OR9A4Q8NGU2 314 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 GABPB2Q8TAK5 448 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-207ENST00000531727 HAS2Q92819 552 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 THAP11Q96EK4 314 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 NDNQ99608 321 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 SLX1AQ9BQ83 275 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 TAS2R13Q9NYV9 303 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 PLA2G3Q9NZ20 509 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 PDE10AQ9Y233 779 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 OSGIN2Q9Y236 505 aa15.94■□□□□ 0.14
CPSF1-207ENST00000531727 TRAV17A0A0B4J275 112 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 CES2O00748 559 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 WFS1O76024 890 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 TTC4O95801 387 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 UQCRHP07919 91 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 C8orf89P0DMQ9 161 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 ICAM2P13598 275 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 COL8A1P27658 744 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 CSNK1G2P78368 415 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 SP140Q13342 867 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 SPANXN3Q5MJ09 141 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 AGTRAPQ6RW13 159 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 C17orf64Q86WR6 236 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 PALM2Q8IXS6 379 aa15.93■□□□□ 0.14
CPSF1-207ENST00000531727 IMMP1LQ96LU5 166 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms