RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PLD3Q8IV08 490 aa11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 L3MBTL4Q8NA19 623 aa11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 OR4D9Q8NGE8 314 aa11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PTCD3Q96EY7 689 aaKnown RBP11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 KCNA7Q96RP8 456 aa11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PLCD4Q9BRC7 762 aa11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SLCO1B3Q9NPD5 702 aa11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TMEM184CQ9NVA4 438 aa11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 THAP1Q9NVV9 213 aa11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 GEMIN8Q9NWZ8 242 aaKnown RBP11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SEMA5BQ9P283 1151 aa11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SNX7Q9UNH6 387 aa11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PCDHGA1Q9Y5H4 931 aa11.67□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TCP11X1B4DZS4 312 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 HAT1O14929 419 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CTSVO60911 334 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 RASSF9O75901 435 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 HRH2P25021 359 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 FOXA1P55317 472 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 E2F1Q01094 437 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SPIDRQ14159 915 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SLBPQ14493 270 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CLPPQ16740 277 aaPredicted RBP11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 LIPJQ5W064 366 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PRSS42Q7Z5A4 293 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ADCK2Q7Z695 626 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CPLX4Q7Z7G2 160 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SLITRK4Q8IW52 837 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CDYL2Q8N8U2 506 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 AGR3Q8TD06 166 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ZUFSPQ96AP4 578 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 GRAMD1AQ96CP6 724 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 DPYSL5Q9BPU6 564 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SYNPO2LQ9H987 977 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 EML4Q9HC35 981 aaKnown RBP11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 FAM60AQ9NP50 221 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ZDHHC2Q9UIJ5 367 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ZNF490Q9ULM2 529 aaPredicted RBP11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 STK38LQ9Y2H1 464 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 COL27A1Q8IZC6 1860 aaPredicted RBP11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 HEATR5BQ9P2D3 2071 aa11.66□□□□□ -0.54
TRAF3IP2-211ENST00000528599 FEZF1A0PJY2 475 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TMEM233B4DJY2 109 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 LCMT2O60294 686 aaKnown RBP11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 UGDHO60701 494 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 DKK1O94907 266 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CAPN1P07384 714 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 THRAP10827 490 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 JUPP14923 745 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SEPHS1P49903 392 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PDX1P52945 283 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CLDN6P56747 220 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 REEP5Q00765 189 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 INSM1Q01101 510 aaPredicted RBP11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 FOXK2Q01167 660 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ZFP36L1Q07352 338 aaKnown RBP11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CPSF6Q16630 551 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 GGTA1PQ4G0N0 100 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TCHHL1Q5QJ38 904 aaPredicted RBP11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CLEC6AQ6EIG7 209 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 GRHL2Q6ISB3 625 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 FBXO42Q6P3S6 717 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 FAM47EQ6ZV65 393 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ARHGAP22Q7Z5H3 698 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 B3GNT8Q7Z7M8 397 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CARFQ8N187 725 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ZNF781Q8N8C0 355 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 C19orf47Q8N9M1 422 aaKnown RBP11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 WDR48Q8TAF3 677 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 KLHL6Q8WZ60 621 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 SEC16BQ96JE7 1060 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 CCDC74BQ96LY2 380 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 FCRL4Q96PJ5 515 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 AIF1LQ9BQI0 150 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 EFCAB11Q9BUY7 163 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PNPOQ9NVS9 261 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 ANKMY1Q9P2S6 941 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TRPS1Q9UHF7 1281 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 HAO1Q9UJM8 370 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 PILRAQ9UKJ1 303 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 RAP2CQ9Y3L5 183 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TIMM22Q9Y584 194 aa11.65□□□□□ -0.54
TRAF3IP2-211ENST00000528599 TRBC2A0A5B9 178 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 FFAR3O14843 346 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TOX3O15405 576 aaPredicted RBP11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 GPR42O15529 346 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HCRTR1O43613 425 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ZBTB11O95625 1053 aaPredicted RBP11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ENO1P06733 434 aaKnown RBP11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 FGF4P08620 206 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 FTH1P19P0C7X4 201 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HGFP14210 728 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SERPINB3P29508 390 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 BCL6P41182 706 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HNF4AP41235 474 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 LAPTM5Q13571 262 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ZRSR2Q15696 482 aaKnown RBP11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SH2D4BQ5SQS7 431 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ADNP2Q6IQ32 1131 aa11.65□□□□□ -0.55
TRAF3IP2-211ENST00000528599 DHRS13Q6UX07 377 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms