RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 TYK2P29597 1187 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 ECHS1P30084 290 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 SERPINB9P50453 376 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 CSNK1G2P78368 415 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 NFKB2Q00653 900 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 OCA2Q04671 838 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 KCNAB2Q13303 367 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 IL10RAQ13651 578 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 TGFBIQ15582 683 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 FAM83EQ2M2I3 478 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 HKDC1Q2TB90 917 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 GARNL3Q5VVW2 1013 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 ZNF385CQ66K41 422 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-215ENST00000528396 KLC3Q6P597 504 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 TRMT10CQ7L0Y3 403 aaKnown RBP12.77□□□□□ -0.37
CAPN1-215ENST00000528396 STAG3L4Q8TBR4 150 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 FKBP10Q96AY3 582 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 OR2A5Q96R48 311 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 PAFAH2Q99487 392 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 ALG9Q9H6U8 611 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 ZNF304Q9HCX3 659 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 NXT1Q9UKK6 140 aaKnown RBP12.77□□□□□ -0.37
CAPN1-215ENST00000528396 G3BP2Q9UN86 482 aaKnown RBP12.77□□□□□ -0.37
CAPN1-215ENST00000528396 RUVBL1Q9Y265 456 aaKnown RBP12.77□□□□□ -0.37
CAPN1-215ENST00000528396 SLC22A14Q9Y267 594 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 MAU2Q9Y6X3 613 aa12.77□□□□□ -0.37
CAPN1-215ENST00000528396 CFAP46Q8IYW2 2715 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 FEZF1A0PJY2 475 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 SUPT3HB4E1H0 165 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 OR1F1O43749 312 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 H2AFYO75367 372 aaKnown RBP12.76□□□□□ -0.37
CAPN1-215ENST00000528396 SUPT3HO75486 399 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 RFPL1O75677 317 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 IPO13O94829 963 aaKnown RBP12.76□□□□□ -0.37
CAPN1-215ENST00000528396 STATHP02808 62 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 SERPIND1P05546 499 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 CAPN1P07384 714 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 LTA4HP09960 611 aaKnown RBP12.76□□□□□ -0.37
CAPN1-215ENST00000528396 SLC35G6P0C7Q6 338 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 SLC35E2BP0CK96 405 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 GNAZP19086 355 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 TFEBP19484 476 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 ITGAXP20702 1163 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 SLC26A3P40879 764 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 OR1D4P47884 311 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 AVPR1BP47901 424 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 EMP3P54852 163 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 PRTGQ2VWP7 1150 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 LINC00303Q3SY05 128 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 LGSNQ5TDP6 509 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 FAM69BQ5VUD6 431 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 OVCH1Q7RTY7 1134 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 TMPRSS11BQ86T26 416 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 ASPGQ86U10 573 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 SNX31Q8N9S9 440 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 CAMKVQ8NCB2 501 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 OR2Y1Q8NGV0 311 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 NEIL2Q969S2 332 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 KIAA1191Q96A73 305 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 PTERQ96BW5 349 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 RHBDF1Q96CC6 855 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 MMABQ96EY8 250 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-215ENST00000528396 UBXN10Q96LJ8 280 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 IP6K3Q96PC2 410 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 AIF1LQ9BQI0 150 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 DRC3Q9H069 523 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 VPS11Q9H270 941 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 ADNPQ9H2P0 1102 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 L2HGDHQ9H9P8 463 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 SNX15Q9NRS6 342 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 SH2B3Q9UQQ2 575 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 KCNMB2Q9Y691 235 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 ATMQ13315 3056 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 HEATR5BQ9P2D3 2071 aa12.76□□□□□ -0.37
CAPN1-215ENST00000528396 KCNE1BA0A087WTH5 132 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 A0A096LPK6 155 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 ARGFXA6NJG6 315 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 SYCE1LA8MT33 242 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 MKRN2OSH3BPM6 223 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 WISP3O95389 354 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-215ENST00000528396 ALBP02768 609 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 FURINP09958 794 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 CNTFP26441 200 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 BCL6P41182 706 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 PMS2P54278 862 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 RRADP55042 308 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 MEF2AQ02078 507 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-215ENST00000528396 SSPNQ14714 243 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 OR4D1Q15615 310 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 CDKL4Q5MAI5 379 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 SULT1C3Q6IMI6 304 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 PCSK4Q6UW60 755 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 MFSD9Q8NBP5 474 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 ABHD11Q8NFV4 315 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 C9orf43Q8TAL5 461 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-215ENST00000528396 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-215ENST00000528396 SLC44A1Q8WWI5 657 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 SLC13A3Q8WWT9 602 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 MVB12AQ96EY5 273 aa12.75□□□□□ -0.37
CAPN1-215ENST00000528396 VPS50Q96JG6 964 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms