RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 MFSD4BQ5TF39 518 aa21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 TTC27Q6P3X3 843 aa21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 ZNF549Q6P9A3 640 aa21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 SPNS2Q8IVW8 549 aa21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 LRRC8AQ8IWT6 810 aa21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 FBXO15Q8NCQ5 510 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 MCUQ8NE86 351 aa21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 GIMAP7Q8NHV1 300 aa21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 CALML6Q8TD86 181 aa21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 PSMF1Q92530 271 aa21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 KCNJ9Q92806 393 aa21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 HAS2Q92819 552 aa21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 TGIF2Q9GZN2 237 aa21.24■□□□□ 0.99
TRAPPC4-208ENST00000527680 GFYI3L273 518 aa21.23■□□□□ 0.99
TRAPPC4-208ENST00000527680 E2F3O00716 465 aa21.23■□□□□ 0.99
TRAPPC4-208ENST00000527680 PCDH17O14917 1159 aa21.23■□□□□ 0.99
TRAPPC4-208ENST00000527680 AP2B1P63010 937 aa21.23■□□□□ 0.99
TRAPPC4-208ENST00000527680 FAM53BQ14153 422 aa21.23■□□□□ 0.99
TRAPPC4-208ENST00000527680 CYHR1Q6ZMK1 362 aa21.23■□□□□ 0.99
TRAPPC4-208ENST00000527680 RIPOR1Q6ZS17 1223 aa21.23■□□□□ 0.99
TRAPPC4-208ENST00000527680 CPNE9Q8IYJ1 553 aa21.23■□□□□ 0.99
TRAPPC4-208ENST00000527680 MCOLN3Q8TDD5 553 aa21.23■□□□□ 0.99
TRAPPC4-208ENST00000527680 MS4A14Q96JA4 679 aa21.23■□□□□ 0.99
TRAPPC4-208ENST00000527680 SERPINB12Q96P63 405 aa21.23■□□□□ 0.99
TRAPPC4-208ENST00000527680 COMMD10Q9Y6G5 202 aa21.23■□□□□ 0.99
TRAPPC4-208ENST00000527680 ZCWPW2A0A1B0GU75 182 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 P2RX6O15547 441 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 NRDCO43847 1150 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 HAUS5O94927 633 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 CELA2AP08217 269 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 MYBL2P10244 700 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 COILP38432 576 aaPredicted RBP21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 SLC1A2P43004 574 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 TNFSF10P50591 281 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 CCDC137Q6PK04 289 aaKnown RBP21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 PALM2Q8IXS6 379 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 LMNTD2Q8IXW0 634 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 OR9A4Q8NGU2 314 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 SUN3Q8TAQ9 357 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 ALKBH8Q96BT7 664 aaKnown RBP21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 PBKQ96KB5 322 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 TMEM184CQ9NVA4 438 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 STMN3Q9NZ72 180 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 FBXO5Q9UKT4 447 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 MED16Q9Y2X0 877 aa21.22■□□□□ 0.99
TRAPPC4-208ENST00000527680 CREBBPQ92793 2442 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 SCN3AQ9NY46 2000 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 A0A1B0GUH1 482 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 C8orf89P0DMQ9 161 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 ITGAMP11215 1152 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 HRH2P25021 359 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 IMPA1P29218 277 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 SOX11P35716 441 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 MINDY4Q4G0A6 757 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 HSP90AA5PQ58FG0 334 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 ABHD17BQ5VST6 288 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 UGT3A1Q6NUS8 523 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 PIWIL4Q7Z3Z4 852 aaKnown RBP21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 FJX1Q86VR8 437 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 ZC3H7AQ8IWR0 971 aaKnown RBP21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 SLX1AQ9BQ83 275 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 ZNF700Q9H0M5 742 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 CCDC177Q9NQR7 707 aaPredicted RBP21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 IARS2Q9NSE4 1012 aaKnown RBP21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 TRMT6Q9UJA5 497 aaKnown RBP21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 PPP2R2CQ9Y2T4 447 aa21.21■□□□□ 0.99
TRAPPC4-208ENST00000527680 CENPEQ02224 2701 aa21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 LOC102723996A0A087X1L8 192 aa21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 A8MUI8 341 aa21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 WDPCPO95876 746 aa21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 SKIV2L2P42285 1042 aaKnown RBP21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 RPS15AP62244 130 aaKnown RBP21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 MPP1Q00013 466 aa21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 PCOLCEQ15113 449 aa21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 TMEM205Q6UW68 189 aa21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 LRRC56Q8IYG6 542 aaPredicted RBP21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 ARHGEF39Q8N4T4 335 aa21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 CD200R1Q8TD46 325 aa21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 NAP1L3Q99457 506 aaPredicted RBP21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 MACROD1Q9BQ69 325 aa21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 TUBB6Q9BUF5 446 aa21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 TEKT2Q9UIF3 430 aa21.2■□□□□ 0.98
TRAPPC4-208ENST00000527680 MYO7BQ6PIF6 2116 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 H0YIG0 161 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 ZG16O60844 167 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 RGS4P49798 205 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 KCNK10P57789 538 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 ZNF33BQ06732 778 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 PTK6Q13882 451 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 GFRALQ6UXV0 394 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 RASGEF1CQ8N431 466 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 EEF1AKMT1Q8WVE0 214 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 SIGLEC10Q96LC7 697 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 CCDC138Q96M89 665 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 TAAR6Q96RI8 345 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 CYTH2Q99418 400 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 FAM167BQ9BTA0 163 aa21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 AARSD1Q9BTE6 412 aaKnown RBP21.19■□□□□ 0.98
TRAPPC4-208ENST00000527680 PCBD2Q9H0N5 130 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms