RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 SLC22A3O75751 556 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 ERGP11308 486 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 SLC2A4P14672 509 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 CAPN3P20807 821 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 RAB28P51157 221 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 UFM1P61960 85 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 TBPL1P62380 186 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 UBE2IP63279 158 aaKnown RBP18.1■□□□□ 0.49
SMPD1-203ENST00000527275 TCF15Q12870 199 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 SGO1Q5FBB7 561 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 AAGABQ6PD74 315 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 RETREG3Q86VR2 466 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 LRRC56Q8IYG6 542 aaPredicted RBP18.1■□□□□ 0.49
SMPD1-203ENST00000527275 HIPK4Q8NE63 616 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 SLC26A7Q8TE54 656 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 TSPEARQ8WU66 669 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 ROPN1LQ96C74 230 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 TEX37Q96LM6 180 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 OR4K3Q96R72 315 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 POT1Q9NUX5 634 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 DNAJC11Q9NVH1 559 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 MAP10Q9P2G4 905 aa18.1■□□□□ 0.49
SMPD1-203ENST00000527275 GIMD1P0DJR0 217 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 EPHA8P29322 1005 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-203ENST00000527275 GCKP35557 465 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 HHEXQ03014 270 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 GPR18Q14330 331 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 ARHGAP19Q14CB8 494 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 CPSF6Q16630 551 aaKnown RBP eCLIP18.09■□□□□ 0.49
SMPD1-203ENST00000527275 RFTN2Q52LD8 501 aaPredicted RBP18.09■□□□□ 0.49
SMPD1-203ENST00000527275 TCEAL6Q6IPX3 200 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 TRIM46Q7Z4K8 759 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 THOC6Q86W42 341 aaKnown RBP18.09■□□□□ 0.49
SMPD1-203ENST00000527275 GATAD2AQ86YP4 633 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.09■□□□□ 0.49
SMPD1-203ENST00000527275 LINC01555Q8NAE3 123 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 TCEAL3Q969E4 200 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 S100A14Q9HCY8 104 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 SLC52A3Q9NQ40 469 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 ZIM2Q9NZV7 527 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 GMEB2Q9UKD1 530 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 ICKQ9UPZ9 632 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 PCDHGA5Q9Y5G8 931 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 CSNK1G3Q9Y6M4 447 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 PCM1Q15154 2024 aa18.09■□□□□ 0.49
SMPD1-203ENST00000527275 NOBOXO60393 691 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 KRT6AP02538 564 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 KRT6BP04259 564 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 MSX2P35548 267 aaPredicted RBP18.08■□□□□ 0.49
SMPD1-203ENST00000527275 KRT6CP48668 564 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 MAZP56270 477 aaKnown RBP18.08■□□□□ 0.49
SMPD1-203ENST00000527275 KCNK10P57789 538 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 CYP2A13Q16696 494 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 IL23RQ5VWK5 629 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 OR4E2Q8NGC2 313 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 LCN9Q8WX39 176 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 USP7Q93009 1102 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 SPDL1Q96EA4 605 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 SLC45A3Q96JT2 553 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 SPATA7Q9P0W8 599 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 ANGPTL2Q9UKU9 493 aa18.08■□□□□ 0.49
SMPD1-203ENST00000527275 TRIM38O00635 465 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 ANPEPP15144 967 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 HSD17B2P37059 387 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 GGTA1PQ4G0N0 100 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 CAPN13Q6MZZ7 669 aaPredicted RBP18.08■□□□□ 0.48
SMPD1-203ENST00000527275 C8orf82Q6P1X6 216 aaPredicted RBP18.08■□□□□ 0.48
SMPD1-203ENST00000527275 SLC9B2Q86UD5 537 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 ARL14Q8N4G2 192 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 RAB42Q8N4Z0 105 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 PRSS33Q8NF86 280 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 SAP25Q8TEE9 199 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 PYDC1Q8WXC3 89 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 MTFMTQ96DP5 389 aaKnown RBP18.08■□□□□ 0.48
SMPD1-203ENST00000527275 SGPP1Q9BX95 441 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 SPAG4Q9NPE6 437 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 CCDC177Q9NQR7 707 aaPredicted RBP18.08■□□□□ 0.48
SMPD1-203ENST00000527275 TMEM45AQ9NWC5 275 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 C15orf41Q9Y2V0 281 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 PCDH15Q96QU1 1955 aa18.08■□□□□ 0.48
SMPD1-203ENST00000527275 A0A1W2PP18 115 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 VGLL3A8MV65 326 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 G6PDP11413 515 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 NPPBP16860 134 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 PKLRP30613 574 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 ZFP36L2P47974 494 aaKnown RBP18.07■□□□□ 0.48
SMPD1-203ENST00000527275 POLR2JP52435 117 aaKnown RBP18.07■□□□□ 0.48
SMPD1-203ENST00000527275 MS4A2Q01362 244 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 HMGCS1Q01581 520 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 RCAN2Q14206 197 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 PLCL1Q15111 1095 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 IMPG1Q17R60 797 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 COQ5Q5HYK3 327 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 ZNF761Q86XN6 746 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-203ENST00000527275 L3MBTL4Q8NA19 623 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 PROKR1Q8TCW9 393 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 ACAT2Q9BWD1 397 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 SNX6Q9UNH7 406 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 MUC6Q6W4X9 2439 aa18.07■□□□□ 0.48
SMPD1-203ENST00000527275 DFNA5O60443 496 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms