RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 VSNL1P62760 191 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 CSNK1G2P78368 415 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 PHEXP78562 749 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 IRF9Q00978 393 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 OCA2Q04671 838 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 CDC20Q12834 499 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 CDC16Q13042 620 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 LAPTM5Q13571 262 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 NCF4Q15080 339 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 RBBP5Q15291 538 aaKnown RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 OR4D1Q15615 310 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 NKAIN1Q4KMZ8 207 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 PRAMEF17Q5VTA0 474 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 MLIPQ5VWP3 458 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 FRMPD2BQ6IN97 320 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 C16orf46Q6P387 395 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ADGRD1Q6QNK2 874 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 NXPE4Q6UWF7 544 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ASPGQ86U10 573 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ISCA2Q86U28 154 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 MYLK4Q86YV6 388 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 SPNS2Q8IVW8 549 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 KLHDC8AQ8IYD2 350 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 LRRC56Q8IYG6 542 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 CENPLQ8N0S6 344 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 RIBC1Q8N443 379 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ENDOVQ8N8Q3 282 aaKnown RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 TRPV3Q8NET8 790 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ABHD11Q8NFV4 315 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ACMSDQ8TDX5 336 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 THAP4Q8WY91 577 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 CCT6BQ92526 530 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 NEIL2Q969S2 332 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 UBE2E3Q969T4 207 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ISL2Q96A47 359 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 FKBP10Q96AY3 582 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 PTERQ96BW5 349 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 RHBDF1Q96CC6 855 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 NXNL1Q96CM4 212 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 IP6K3Q96PC2 410 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 UBL7Q96S82 380 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 MRPL57Q9BQC6 102 aaKnown RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 EFCAB11Q9BUY7 163 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 YIPF2Q9BWQ6 316 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 TXLNGYQ9BZA5 131 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 CD244Q9BZW8 370 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 SPRY4Q9C004 299 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 PITHD1Q9GZP4 211 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 DRC3Q9H069 523 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 IQCGQ9H095 443 aaKnown RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 MRPL46Q9H2W6 279 aaKnown RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 EHD1Q9H4M9 534 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 PRORYQ9H606 182 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ANKZF1Q9H8Y5 726 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ANKHQ9HCJ1 492 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZNF304Q9HCX3 659 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 IGSF5Q9NSI5 407 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 STARD5Q9NSY2 213 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 DHCR7Q9UBM7 475 aaKnown RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 TBK1Q9UHD2 729 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 IKZF3Q9UKT9 509 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 POLHQ9Y253 713 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 FARSAQ9Y285 508 aaKnown RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 PCDHGA6Q9Y5G7 932 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 V9GYY5 206 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 CEP295Q9C0D2 2601 aa5.16□□□□□ -1.58
HMGB1P40-201ENST00000525121 UNC13CQ8NB66 2214 aa5.15□□□□□ -1.58
HMGB1P40-201ENST00000525121 LOC105369274A0A096LPK9 316 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 LOC102723532A0A0G2JNH3 316 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 TLDC2A0PJX2 215 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 FEZF1A0PJY2 475 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 HMX2A2RU54 273 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 CDC14CA4D256 554 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ANKDD1BA6NHY2 528 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ERVH48-1M5A8F1 160 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 HCRTR1O43613 425 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 NRP2O60462 931 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 GLRA3O75311 464 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 RECKO95980 971 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 ALBP02768 609 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 GSTA1P08263 222 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 C1GALT1C1LP0DN25 315 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SFTPCP11686 197 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 EPB42P16452 691 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SERPINB1P30740 379 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 AHRP35869 848 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 HSD17B3P37058 310 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 BCL6P41182 706 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 GDF5P43026 501 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 MAGEA12P43365 314 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 CCR10P46092 362 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLCO1A2P46721 670 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC6A12P48065 614 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 RRADP55042 308 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 STXBP1P61764 594 aaKnown RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 YBX1P67809 324 aaKnown RBP5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 CYP4F2P78329 520 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 REEP5Q00765 189 aa5.15□□□□□ -1.59
HMGB1P40-201ENST00000525121 MEF2AQ02078 507 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms