RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CPNE5Q9HCH3 593 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ZBTB26Q9HCK0 441 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 KCNK9Q9NPC2 374 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 FBXO8Q9NRD0 319 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 THSD1Q9NS62 852 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 GEMIN8Q9NWZ8 242 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SEMA5BQ9P283 1151 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 OPTCQ9UBM4 332 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 FETUBQ9UGM5 382 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 IL17BQ9UHF5 180 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 LGALS13Q9UHV8 139 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SERTAD3Q9UJW9 196 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 PILRAQ9UKJ1 303 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 ZMIZ1Q9ULJ6 1067 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 SNX7Q9UNH6 387 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 PLCL2Q9UPR0 1127 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 RUVBL1Q9Y265 456 aaKnown RBP4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 BTRCQ9Y297 605 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 RNF11Q9Y3C5 154 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 PCDHGA8Q9Y5G5 932 aa4.4□□□□□ -1.71
CHMP4A-202ENST00000524955 A0A0A6YYC8 382 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 MYOCOSA0A1B0GUC4 107 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ARHGAP10A1A4S6 786 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 HYKKA2RU49 373 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 OR2W5A6NFC9 320 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 SYCE1LA8MT33 242 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 B4E171 279 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 H3BMH7 237 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 I3L1I5 382 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 K7EPI3 171 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 RTCAO00442 366 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 E2F3O00716 465 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 UBFD1O14562 309 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 OR7A17O14581 309 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 NVLO15381 856 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ZSCAN9O15535 394 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 NDUFS4O43181 175 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 EFSO43281 561 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 KLK8O60259 260 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 PLIN3O60664 434 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CNOT3O75175 753 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 H2AFYO75367 372 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 JRKO75564 520 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 SUPT7LO94864 414 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 OR4F21O95013 312 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CCNDBP1O95273 360 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 DLGAP3O95886 979 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TGFB1P01137 390 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TUBBP07437 444 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 MYZAPP0CAP1 466 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF888P0CJ79 500 aaPredicted RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 PRKAR1AP10644 381 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 MYL2P10916 166 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 FGF5P12034 268 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 COL6A2P12110 1019 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 LIFP15018 202 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CPA3P15088 417 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 EPB42P16452 691 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 GNAZP19086 355 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TCN2P20062 427 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TAC1P20366 129 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ITGAXP20702 1163 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CCND1P24385 295 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 SERPINB3P29508 390 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ALDH3A1P30838 453 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CRHR1P34998 444 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 GGT5P36269 586 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 SLC26A3P40879 764 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TSPAN7P41732 249 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CCT5P48643 541 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 HNMTP50135 292 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 HTR6P50406 440 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CCR8P51685 355 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 NAGLUP54802 743 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ALDH18A1P54886 795 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 PCBP4P57723 403 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 RAB15P59190 212 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 RAB8AP61006 207 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 MAGOHP61326 146 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 OLR1P78380 273 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ABATP80404 500 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 REEP5Q00765 189 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 IRF8Q02556 426 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 SLC18A2Q05940 514 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ILF2Q12905 390 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 EIF3IQ13347 325 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 GTF2H2Q13888 395 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ERV3-1Q14264 604 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 IL11RAQ14626 422 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 PCLAFQ15004 111 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 PCBP2Q15366 365 aaKnown RBP eCLIP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 CPSF6Q16630 551 aaKnown RBP eCLIP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ST3GAL2Q16842 350 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 UNC50Q53HI1 259 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ZC3H12BQ5HYM0 836 aaKnown RBP4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TOR1AIP1Q5JTV8 583 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF678Q5SXM1 525 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 TMEM164Q5U3C3 297 aa4.39□□□□□ -1.71
CHMP4A-202ENST00000524955 MLIPQ5VWP3 458 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms