RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 WFS1O76024 890 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 TNFSF15O95150 251 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 CCNDBP1O95273 360 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 GRK2P25098 689 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 SERPINB5P36952 375 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 GRIA3P42263 894 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 SLC1A6P48664 564 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 ERVPABLB-1P60509 514 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 ABCE1P61221 599 aaKnown RBP14.69□□□□□ -0.06
LSM1-203ENST00000520755 STX3Q13277 289 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 ZIC1Q15915 447 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 RBBP7Q16576 425 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 CFAP157Q5JU67 520 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 TMTC4Q5T4D3 741 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 FCRL6Q6DN72 434 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 PAQR7Q86WK9 346 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 D2HGDHQ8N465 521 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 ABHD11Q8NFV4 315 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 OR4F6Q8NGB9 312 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 PPP1R14CQ8TAE6 165 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 PPP4R1Q8TF05 950 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 SREK1Q8WXA9 508 aaKnown RBP14.69□□□□□ -0.06
LSM1-203ENST00000520755 NXPE2Q96DL1 559 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 OR6C1Q96RD1 312 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 CTRCQ99895 268 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 TRMOQ9BU70 441 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 NTMT1Q9BV86 223 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 CCDC134Q9H6E4 229 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 SLCO1B3Q9NPD5 702 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 SIDT1Q9NXL6 827 aaKnown RBP14.69□□□□□ -0.06
LSM1-203ENST00000520755 SLC39A1Q9NY26 324 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 BTRCQ9Y297 605 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 ANGPTL3Q9Y5C1 460 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 KLK4Q9Y5K2 254 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 KCNE2Q9Y6J6 123 aa14.69□□□□□ -0.06
LSM1-203ENST00000520755 OR2A25A4D2G3 310 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 TMEM233B4DJY2 109 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 OR4F21O95013 312 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 FKBP9O95302 570 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 MLYCDO95822 493 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 NEFHP12036 1026 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 FOLR1P15328 257 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 GNAZP19086 355 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 RBMS1P29558 406 aaKnown RBP14.68□□□□□ -0.06
LSM1-203ENST00000520755 CCNG1P51959 295 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 FOXA1P55317 472 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 NAA20P61599 178 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 CSNK1G2P78368 415 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 ABATP80404 500 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 REEP5Q00765 189 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 MEF2AQ02078 507 aaPredicted RBP14.68□□□□□ -0.06
LSM1-203ENST00000520755 GALNT1Q10472 559 aaPredicted RBP14.68□□□□□ -0.06
LSM1-203ENST00000520755 CHIT1Q13231 466 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 DOC2AQ14183 400 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 GPR19Q15760 415 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 DEFB110Q30KQ9 67 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 ATG9BQ674R7 924 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 FIGLAQ6QHK4 219 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 NXPE4Q6UWF7 544 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 ADCK2Q7Z695 626 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 CUZD1Q86UP6 607 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 TRIM42Q8IWZ5 723 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 BMPERQ8N8U9 685 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 L3MBTL4Q8NA19 623 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 ZNF740Q8NDX6 193 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 OR4K1Q8NGD4 311 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 LRRC8CQ8TDW0 803 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 PMEPA1Q969W9 287 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 TCTN2Q96GX1 697 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 KCNA7Q96RP8 456 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 DPH7Q9BTV6 452 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 PELI2Q9HAT8 420 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 APMAPQ9HDC9 416 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 FAM60AQ9NP50 221 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 MID1IP1Q9NPA3 183 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 GEMIN8Q9NWZ8 242 aaKnown RBP14.68□□□□□ -0.06
LSM1-203ENST00000520755 HAO1Q9UJM8 370 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 RNF11Q9Y3C5 154 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 PCDHGA8Q9Y5G5 932 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 WDFY3Q8IZQ1 3526 aa14.68□□□□□ -0.06
LSM1-203ENST00000520755 FER1L5A0AVI2 2057 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 B4E171 279 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 H7BY64 318 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 HAT1O14929 419 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 CLGNO14967 610 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 BRINP1O60477 761 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 KATNA1O75449 491 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 OTCP00480 354 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 C1GALT1C1LP0DN25 315 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 TSPAN7P41732 249 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 CASP2P42575 452 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 PKNOX1P55347 436 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 MC2RQ01718 297 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 IRF8Q02556 426 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 ACY1Q03154 408 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 TUBB3Q13509 450 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 SLBPQ14493 270 aaKnown RBP eCLIP14.67□□□□□ -0.06
LSM1-203ENST00000520755 RTP5Q14D33 572 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 TBCCQ15814 346 aa14.67□□□□□ -0.06
LSM1-203ENST00000520755 GGTA1PQ4G0N0 100 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms