RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 C10orf90Q96M02 699 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 MESP1Q9BRJ9 268 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 SGPP1Q9BX95 441 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 DPH5Q9H2P9 285 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 CLMPQ9H6B4 373 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 SOX17Q9H6I2 414 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-215ENST00000519474 WDR54Q9H977 334 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 ATP13A2Q9NQ11 1180 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 GRHL1Q9NZI5 618 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 WHRNQ9P202 907 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 CORO1CQ9ULV4 474 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-215ENST00000519474 SH2B3Q9UQQ2 575 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 RUVBL1Q9Y265 456 aaKnown RBP8.9□□□□□ -0.98
HDAC3-215ENST00000519474 ZNF451Q9Y4E5 1061 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 BAHCC1Q9P281 2608 aa8.9□□□□□ -0.98
HDAC3-215ENST00000519474 MDC1Q14676 2089 aaKnown RBP8.89□□□□□ -0.99
HDAC3-215ENST00000519474 IGLV3-12A0A075B6K2 115 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 FEZF1A0PJY2 475 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 CXorf49A8MYA2 514 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-215ENST00000519474 HAT1O14929 419 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 P2RX6O15547 441 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 TPPPO94811 219 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 CCNDBP1O95273 360 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 IGHEP01854 428 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 C1QAP02745 245 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 HIST1H2AGP0C0S8 130 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-215ENST00000519474 ZGLP1P0C6A0 271 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 HIST1H2ADP20671 130 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 HRH2P25021 359 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 SLC26A3P40879 764 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 PGDP52209 483 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 TAS2R39P59534 338 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 KLC1Q07866 573 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 C2orf54Q08AI8 447 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 PDAP1Q13442 181 aaKnown RBP8.89□□□□□ -0.99
HDAC3-215ENST00000519474 RAPSNQ13702 412 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 PLEKHN1Q494U1 663 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-215ENST00000519474 GARNL3Q5VVW2 1013 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 FAM45BPQ6NSW5 357 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 C16orf87Q6PH81 154 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 LCTLQ6UWM7 567 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 C3orf62Q6ZUJ4 267 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 VN1R4Q7Z5H5 301 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 STRA8Q7Z7C7 330 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 ZBED8Q8IZ13 594 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 CSNK1A1LQ8N752 337 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 OR4K1Q8NGD4 311 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 OR56A3Q8NH54 315 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 FAM45AQ8TCE6 357 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 PYROXD1Q8WU10 500 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 C17orf50Q8WW18 174 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 ALKBH8Q96BT7 664 aaKnown RBP8.89□□□□□ -0.99
HDAC3-215ENST00000519474 CABS1Q96KC9 395 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 HIST1H2AHQ96KK5 128 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 OR4K3Q96R72 315 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 HIST1H2AJQ99878 128 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 MACROD1Q9BQ69 325 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 H2AFJQ9BTM1 129 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 PCBD2Q9H0N5 130 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 CCDC177Q9NQR7 707 aaPredicted RBP8.89□□□□□ -0.99
HDAC3-215ENST00000519474 SEMA3GQ9NS98 782 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 GPR83Q9NYM4 423 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 C5AR2Q9P296 337 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 CTSFQ9UBX1 484 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 CDC14AQ9UNH5 594 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 PLAAQ9Y263 795 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 MTO1Q9Y2Z2 717 aaKnown RBP8.89□□□□□ -0.99
HDAC3-215ENST00000519474 MRPS2Q9Y399 296 aaKnown RBP8.89□□□□□ -0.99
HDAC3-215ENST00000519474 HS3ST3B1Q9Y662 390 aa8.89□□□□□ -0.99
HDAC3-215ENST00000519474 CDC7O00311 574 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 TXNDC9O14530 226 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 FFAR3O14843 346 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 EIF3HO15372 352 aaKnown RBP eCLIP8.88□□□□□ -0.99
HDAC3-215ENST00000519474 GPR42O15529 346 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 STATHP02808 62 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 EZRP15311 586 aaKnown RBP8.88□□□□□ -0.99
HDAC3-215ENST00000519474 SAT1P21673 171 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 CD97P48960 835 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 GPX6P59796 221 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 OCA2Q04671 838 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 Q0VFX4 171 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 SP140Q13342 867 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 FAM53BQ14153 422 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 MYBPC3Q14896 1274 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 SYT16Q17RD7 645 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 PRAMEF13Q5VWM6 474 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 JMJD6Q6NYC1 403 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-215ENST00000519474 SBSNQ6UWP8 590 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 IGFL3Q6UXB1 125 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 ZNF572Q7Z3I7 529 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-215ENST00000519474 ADCK2Q7Z695 626 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 SLC26A11Q86WA9 606 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 C17orf64Q86WR6 236 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 CEP97Q8IW35 865 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 PARP9Q8IXQ6 854 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 PRSS58Q8IYP2 241 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 GALNT16Q8N428 558 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 AMER2Q8N7J2 671 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 AMER3Q8N944 861 aa8.88□□□□□ -0.99
HDAC3-215ENST00000519474 CLEC1AQ8NC01 280 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms