RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 INSL6Q9Y581 213 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 CROCCQ5TZA2 2017 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 SAGE2PA6NJ88 616 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 LOC730098B7Z3J9 87 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 H0YC42 278 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 TMX2-CTNND1H3BSU7 103 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 UBFD1O14562 309 aaKnown RBP10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 DFNA5O60443 496 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 BCAS1O75363 584 aaPredicted RBP10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 RFTN2Q52LD8 501 aaPredicted RBP10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 PDE12Q6L8Q7 609 aaKnown RBP10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 GPR153Q6NV75 609 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 FAM180AQ6UWF9 173 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 Q6ZVL8 140 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 SPRED1Q7Z699 444 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 GRASPQ7Z6J2 395 aaPredicted RBP10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 RHEBL1Q8TAI7 183 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 GPR32O75388 356 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 NPPAP01160 153 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 STATHP02808 62 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 EMX2Q04743 252 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 SRSF11Q05519 484 aaKnown RBP10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 PCDH1Q08174 1060 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 LY6G5CQ5SRR4 150 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 IRAK1BP1Q5VVH5 260 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 LRRC66Q68CR7 880 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 DENND5AQ6IQ26 1287 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 ENPP6Q6UWR7 440 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 SCML4Q8N228 414 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 OR4F6Q8NGB9 312 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 ITPKCQ96DU7 683 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 PGAP3Q96FM1 320 aaPredicted RBP10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 RDH12Q96NR8 316 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 TNFRSF12AQ9NP84 129 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 SACM1LQ9NTJ5 587 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 USP22Q9UPT9 525 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 COLEC10Q9Y6Z7 277 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 PRAMEF11O60813 436 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 TNFRSF21O75509 655 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLC25A12O75746 678 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 GBAP04062 536 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 CD247P20963 164 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 ACTR1BP42025 376 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 ACTR1AP61163 376 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 PTCHD3Q3KNS1 767 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 OTUD1Q5VV17 481 aaPredicted RBP10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 PRR23BQ6ZRT6 265 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 CADM2Q8N3J6 435 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 GLB1L3Q8NCI6 653 aaPredicted RBP10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 IGSF8Q969P0 613 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 VPS29Q9UBQ0 182 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 SSR3Q9UNL2 185 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 INSL5Q9Y5Q6 135 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 FADS2P1A8MWK0 482 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 PTGESO14684 152 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 TFECO14948 347 aaPredicted RBP10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 COCHO43405 550 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 PCDH7O60245 1069 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 OR1I1O60431 355 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 HPRP00739 348 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 FUCA1P04066 466 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 FGF4P08620 206 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 TYRP14679 529 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 TIE1P35590 1138 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLBPQ14493 270 aaKnown RBP eCLIP10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 TAF13Q15543 124 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 ARHGAP12Q8IWW6 846 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 DCSTAMPQ9H295 470 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 MRPL39Q9NYK5 338 aaKnown RBP10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 ERVK-18Q9QC07 812 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 MKL2Q9ULH7 1088 aa10.53□□□□□ -0.72
PCDHGA1-202ENST00000517417 OPN1SWP03999 348 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 CCL5P13501 91 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 SHMT2P34897 504 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 RAPSNQ13702 412 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 ATP13A5Q4VNC0 1218 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 DCST1Q5T197 706 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 OR4F3Q6IEY1 312 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 PAQR9Q6ZVX9 377 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 SPARTQ8N0X7 666 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 DTWD1Q8N5C7 304 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 OR5AK3PQ8NH89 298 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 NT5C3BQ969T7 300 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 TMEM248Q9NWD8 314 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 AKAP7Q9P0M2 348 aaPredicted RBP10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLAMF8Q9P0V8 285 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 CRNNQ9UBG3 495 aaPredicted RBP10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 SARDHQ9UL12 918 aa10.52□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZNF646O15015 1829 aaPredicted RBP10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 SLC1A7O00341 560 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 STX16O14662 325 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 FGF18O76093 207 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 CHRNA1P02708 482 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 SLC35G6P0C7Q6 338 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 PRSS56P0CW18 603 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 HLA-EP13747 358 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 AGXTP21549 392 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 CMPK1P30085 196 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 CD47Q08722 323 aa10.52□□□□□ -0.73
PCDHGA1-202ENST00000517417 SPANXN4Q5MJ08 99 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms