RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SHHQ15465 462 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 MDH1BQ5I0G3 518 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 FAM109BQ6ICB4 259 aaPredicted RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 WBP2NLQ6ICG8 309 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 RPUSD3Q6P087 351 aaKnown RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 TEX38Q6PEX7 206 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 STOX1Q6ZVD7 989 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 TMPRSS11FQ6ZWK6 438 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 TRMT1LQ7Z2T5 733 aaKnown RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 DEFB128Q7Z7B8 93 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 DNAJC22Q8N4W6 341 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 FAM133AQ8N9E0 248 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 IQUBQ8NA54 791 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 TDRD5Q8NAT2 981 aaKnown RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 TAS1R2Q8TE23 839 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 SYN2Q92777 582 aaPredicted RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 SPDL1Q96EA4 605 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 THOC1Q96FV9 657 aaKnown RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 JAKMIP1Q96N16 626 aaKnown RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 ZNF558Q96NG5 402 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 SERINC2Q96SA4 455 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 LZTS2Q9BRK4 669 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 LSG1Q9H089 658 aaKnown RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 TRPV6Q9H1D0 765 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 DPAGT1Q9H3H5 408 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 DDX31Q9H8H2 851 aaKnown RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 ANKZF1Q9H8Y5 726 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 PSTPIP2Q9H939 334 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 CNOT10Q9H9A5 744 aaKnown RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 APOBEC3GQ9HC16 384 aaKnown RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 TCF7L2Q9NQB0 619 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 TAAR2Q9P1P5 351 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 MAD2L2Q9UI95 211 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 WBP11Q9Y2W2 641 aaKnown RBP3.97□□□□□ -1.77
HTT-210ENST00000512909 ZSWIM8A7E2V4 1837 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 MAST2Q6P0Q8 1798 aa3.97□□□□□ -1.77
HTT-210ENST00000512909 ZMYM6O95789 1325 aa3.96□□□□□ -1.77
HTT-210ENST00000512909 KLF18A0A0U1RQI7 1052 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 CLEC18AA5D8T8 446 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 SRRM3A6NNA2 597 aaPredicted RBP3.96□□□□□ -1.78
HTT-210ENST00000512909 PSMA7O14818 248 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 LDB3O75112 727 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 CABYRO75952 493 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 REC8O95072 547 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 PLEKHA8P1O95397 391 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 GH1P01241 217 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 F7P08709 466 aaPredicted RBP3.96□□□□□ -1.78
HTT-210ENST00000512909 SUPT20HL2P0C7V6 817 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 HLA-DOBP13765 273 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 PLA2G2AP14555 144 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 PSMA5P28066 241 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 NOVP48745 357 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 NT5C2P49902 561 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 MMP15P51511 669 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 NAPAP54920 295 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 PHEXP78562 749 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 MBTD1Q05BQ5 628 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 MFAP5Q13361 173 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 KRBOX4Q5JUW0 171 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 STXBP5Q5T5C0 1151 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 RNASEH2BQ5TBB1 312 aaKnown RBP3.96□□□□□ -1.78
HTT-210ENST00000512909 C11orf63Q6NUN7 778 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 BLOC1S2Q6QNY1 142 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 PET117Q6UWS5 81 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 ZNF852Q6ZMS4 543 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 DENND5BQ6ZUT9 1274 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 Q75L30 129 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 PLPPR4Q7Z2D5 763 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 PIWIL4Q7Z3Z4 852 aaKnown RBP3.96□□□□□ -1.78
HTT-210ENST00000512909 SLFN11Q7Z7L1 901 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 VSIG1Q86XK7 387 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 TDHQ8IZJ6 230 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 RYBPQ8N488 228 aaPredicted RBP3.96□□□□□ -1.78
HTT-210ENST00000512909 DEFB123Q8N688 67 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 LMNTD1Q8N9Z9 388 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 L3MBTL4Q8NA19 623 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 CAMKVQ8NCB2 501 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 CLEC18CQ8NCF0 446 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 KLHDC9Q8NEP7 349 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 KIF18AQ8NI77 898 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 SPATA20Q8TB22 786 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 SORCS1Q8WY21 1168 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 SPATA33Q96N06 139 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 IWS1Q96ST2 819 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 EGFL8Q99944 293 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 MTG1Q9BT17 334 aaPredicted RBP3.96□□□□□ -1.78
HTT-210ENST00000512909 ABHD6Q9BV23 337 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 PRRG4Q9BZD6 226 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 SPRY4Q9C004 299 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 LY9Q9HBG7 655 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 ZBTB20Q9HC78 741 aaPredicted RBP3.96□□□□□ -1.78
HTT-210ENST00000512909 TBC1D7Q9P0N9 293 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 CRNNQ9UBG3 495 aaPredicted RBP3.96□□□□□ -1.78
HTT-210ENST00000512909 PADI2Q9Y2J8 665 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 CCL27Q9Y4X3 112 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 TNFRSF18Q9Y5U5 241 aa3.96□□□□□ -1.78
HTT-210ENST00000512909 TRIP12Q14669 1992 aaPredicted RBP3.96□□□□□ -1.78
HTT-210ENST00000512909 ELP1O95163 1332 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 MROH7Q68CQ1 1323 aa3.95□□□□□ -1.78
HTT-210ENST00000512909 BAZ2AQ9UIF9 1905 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms