RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 PHEXP78562 749 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 RELAQ04206 551 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 EMX2Q04743 252 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ACTN3Q08043 901 aaPredicted RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 KLF10Q13118 480 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 CHIT1Q13231 466 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 RTP5Q14D33 572 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ELOCQ15369 112 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ZRSR2Q15696 482 aaKnown RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 HIST2H2ACQ16777 129 aaPredicted RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 C18orf21Q32NC0 220 aaPredicted RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 COQ5Q5HYK3 327 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 PRAMEF14Q5SWL7 426 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 PRAMEF13Q5VWM6 474 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 NXNQ6DKJ4 435 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 HIST2H2AA3Q6FI13 130 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ASRGL1Q7L266 308 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 GPR155Q7Z3F1 870 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ZNF605Q86T29 641 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 C17orf64Q86WR6 236 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 LAS2Q8IYD9 372 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 PHACTR4Q8IZ21 702 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 SLC22A18ASQ8N1D0 253 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ZNF248Q8NDW4 579 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ABHD11Q8NFV4 315 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 TTLQ8NG68 377 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 SLC5A11Q8WWX8 675 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ZDHHC16Q969W1 377 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ESAMQ96AP7 390 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 TUBGCP3Q96CW5 907 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 MED8Q96G25 268 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ZNF578Q96N58 590 aaPredicted RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 OR4K3Q96R72 315 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 MYOCQ99972 504 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 SARGQ9BW04 601 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 DPH1Q9BZG8 443 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ELOVL6Q9H5J4 265 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 AKTIPQ9H8T0 292 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 MRPL40Q9NQ50 206 aaKnown RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 SIRT5Q9NXA8 310 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 NOP53Q9NZM5 478 aaKnown RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 ZIM2Q9NZV7 527 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 MOSPD1Q9UJG1 213 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 RAXQ9Y2V3 346 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 CCL27Q9Y4X3 112 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ENTPD2Q9Y5L3 495 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 COPG1Q9Y678 874 aaKnown RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 ACACAQ13085 2346 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ERVH48-1M5A8F1 160 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 ZW10O43264 779 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 T-ENOLP0DO92 83 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 SFTPCP11686 197 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 HOXB1P14653 301 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 RPL10P27635 214 aaKnown RBP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 ARFIP1P53367 373 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 CORO7P57737 925 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 NXPH1P58417 271 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 HNRNPKP61978 463 aaKnown RBP eCLIP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 EIF2B5Q13144 721 aaKnown RBP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 STX5Q13190 355 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 DOC2AQ14183 400 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 KRT33BQ14525 404 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 KIR2DS3Q14952 304 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 CCSMST1Q4G0I0 132 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 DNAL1Q4LDG9 190 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 PDCD4Q53EL6 469 aaKnown RBP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 FBXO48Q5FWF7 155 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 XKR6Q5GH73 641 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 C6orf136Q5SQH8 315 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 TPRG1LQ5T0D9 272 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 C6orf132Q5T0Z8 1188 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 MED27Q6P2C8 311 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 IYDQ6PHW0 289 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 C19orf48Q6RUI8 117 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 ZFAND4Q86XD8 727 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 NRROSQ86YC3 692 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 HID1Q8IV36 788 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 KRT78Q8N1N4 520 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 ARHGAP24Q8N264 748 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 MIER2Q8N344 545 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 TBC1D19Q8N5T2 526 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 GLB1L3Q8NCI6 653 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 OR4K1Q8NGD4 311 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 SNIP1Q8TAD8 396 aaKnown RBP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 WDR20Q8TBZ3 569 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 STARD8Q92502 1023 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 NEIL2Q969S2 332 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 KLHL29Q96CT2 875 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 CXorf40BQ96DE9 158 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 CMTM7Q96FZ5 175 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 FCRL1Q96LA6 429 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 C3orf30Q96M34 536 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 SLC6A18Q96N87 628 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 DEPDC7Q96QD5 511 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 RAB3IPQ96QF0 476 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-228ENST00000511676 FERD3LQ96RJ6 166 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 KCNA7Q96RP8 456 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 SLC25A23Q9BV35 468 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 ATG10Q9H0Y0 220 aa8.77□□□□□ -1.01
NR1I3-228ENST00000511676 FSCN3Q9NQT6 498 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms