RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 PTBP2Q9UKA9 531 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-215ENST00000511586 LHX6Q9UPM6 363 aa6.84□□□□□ -1.31
PDLIM5-215ENST00000511586 SLC22A14Q9Y267 594 aa6.84□□□□□ -1.31
PDLIM5-215ENST00000511586 FARSAQ9Y285 508 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-215ENST00000511586 DYRK1BQ9Y463 629 aa6.84□□□□□ -1.31
PDLIM5-215ENST00000511586 PCDHGA6Q9Y5G7 932 aa6.84□□□□□ -1.31
PDLIM5-215ENST00000511586 PCDHGA4Q9Y5G9 962 aa6.84□□□□□ -1.31
PDLIM5-215ENST00000511586 ADAMTS20P59510 1910 aa6.84□□□□□ -1.32
PDLIM5-215ENST00000511586 KCNE1BA0A087WTH5 132 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 IQANK1A0A1B0GTG1 560 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 A0A1B0GX78 115 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 FEZF1A0PJY2 475 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 SUPT3HB4E1H0 165 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 C9J4A7 227 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 DSCR3O14972 297 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 TAPBPO15533 448 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 SUPT3HO75486 399 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 STK16O75716 305 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 RECKO95980 971 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 CD63P08962 238 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 RBP1P09455 135 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 RAB40ALP0C0E4 278 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 PIM1P11309 404 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 GNAZP19086 355 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 GCAP28676 217 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 GDF5P43026 501 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 MAGEA12P43365 314 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 GCGRP47871 477 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 SLC6A12P48065 614 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 GLRBP48167 497 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 HSPA7P48741 367 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 EMP3P54852 163 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 CBX1P83916 185 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 IRF9Q00978 393 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 IFFO1Q0D2I5 559 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 MUM1Q2TAK8 710 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 PRTGQ2VWP7 1150 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 NKAIN1Q4KMZ8 207 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 CRTC2Q53ET0 693 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 CATSPEREQ5SY80 951 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 C1orf189Q5VU69 101 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 GARNL3Q5VVW2 1013 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 ZNF385CQ66K41 422 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 LCN10Q6JVE6 187 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 PRMT9Q6P2P2 845 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 TIFABQ6ZNK6 161 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 TTLL10Q6ZVT0 673 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 PLD3Q8IV08 490 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 CSNK1A1LQ8N752 337 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 PDPRQ8NCN5 879 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 OR4K1Q8NGD4 311 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 SLC5A11Q8WWX8 675 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 STARD8Q92502 1023 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 EXT2Q93063 718 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 NEIL2Q969S2 332 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 CABS1Q96KC9 395 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 TSNARE1Q96NA8 513 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 GPR78Q96P69 363 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 GBP5Q96PP8 586 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 ATOH8Q96SQ7 321 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 NLNQ9BYT8 704 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 PPCSQ9HAB8 311 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 DNAJC11Q9NVH1 559 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 FAM53CQ9NYF3 392 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 GPRC5BQ9NZH0 403 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 NUDT4Q9NZJ9 180 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 IFT80Q9P2H3 777 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 NDOR1Q9UHB4 597 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 IL17BQ9UHF5 180 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 GPN3Q9UHW5 284 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 SH2B3Q9UQQ2 575 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 PLAAQ9Y263 795 aa6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 MRPS18BQ9Y676 258 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-215ENST00000511586 USP24Q9UPU5 2620 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 TRBC2A0A5B9 178 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 H3BQF6 201 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 UBXN8O00124 270 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 CLGNO14967 610 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 POLR3GO15318 223 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 NKX2-8O15522 239 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 OR1F1O43749 312 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 LCMT2O60294 686 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 CCNT2O60583 730 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 H2AFYO75367 372 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 CREG1O75629 220 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 ONECUT2O95948 504 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 ALBP02768 609 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 SHBGP04278 402 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 CAPN1P07384 714 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 C1GALT1C1LP0DN25 315 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 PRKAR1AP10644 381 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 MTHFD2P13995 350 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 GFAPP14136 432 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 CXCR2P25025 360 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 HSD17B3P37058 310 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 BCL6P41182 706 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 CYP4F2P78329 520 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 MEF2AQ02078 507 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 RHDQ02161 417 aa6.82□□□□□ -1.32
PDLIM5-215ENST00000511586 CDC20Q12834 499 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms