RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, human

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-231	ENST00000510245	LINC00696	Q6ZRV3	163 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	CLNK	Q7Z7G1	428 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	DSEL	Q8IZU8	1212 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	NKAP	Q8N5F7	415 aa	Known RBP	7.18	□□□□□ -1.26
CAST-231	ENST00000510245	ATG16L2	Q8NAA4	619 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	AVL9	Q8NBF6	648 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	KIAA0895	Q8NCT3	520 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	AGAP11	Q8TF27	550 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	IPCEF1	Q8WWN9	437 aa	Predicted RBP	7.18	□□□□□ -1.26
CAST-231	ENST00000510245	CPT1B	Q92523	772 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	SHC3	Q92529	594 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	ZDHHC12	Q96GR4	267 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	ZNF514	Q96K75	400 aa	Predicted RBP	7.18	□□□□□ -1.26
CAST-231	ENST00000510245	GDAP1L1	Q96MZ0	367 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	LRFN5	Q96NI6	719 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	MOGAT1	Q96PD6	335 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	MED15	Q96RN5	788 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	MAP3K3	Q99759	626 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	NCAPG	Q9BPX3	1015 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	MAGEB5	Q9BZ81	275 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	AMBRA1	Q9C0C7	1298 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	KCNJ16	Q9NPI9	418 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	AKIP1	Q9NQ31	210 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	HEYL	Q9NQ87	328 aa	Predicted RBP	7.18	□□□□□ -1.26
CAST-231	ENST00000510245	RASSF1	Q9NS23	344 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	CISH	Q9NSE2	258 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	OGFR	Q9NZT2	677 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	GRHPR	Q9UBQ7	328 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	AKAP6	Q13023	2319 aa		7.18	□□□□□ -1.26
CAST-231	ENST00000510245	NCOA6	Q14686	2063 aa	Predicted RBP	7.18	□□□□□ -1.26
CAST-231	ENST00000510245	TRAV17	A0A0B4J275	112 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	MARCH11	A6NNE9	402 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	LGALS16	A8MUM7	142 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	TGFB1I1	O43294	461 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	ZMPSTE24	O75844	475 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	RASAL1	O95294	804 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	IVL	P07476	585 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	ABO	P16442	354 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	ITGAL	P20701	1170 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	HOXD13	P35453	343 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	HADHA	P40939	763 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	FOLR3	P41439	243 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	GEMIN4	P57678	1058 aa	Known RBP	7.17	□□□□□ -1.26
CAST-231	ENST00000510245	SNRPF	P62306	86 aa	Known RBP	7.17	□□□□□ -1.26
CAST-231	ENST00000510245	SLC25A3	Q00325	362 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	MTA1	Q13330	715 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	DYRK1A	Q13627	763 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	BLMH	Q13867	455 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	ME3	Q16798	604 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	UGP2	Q16851	508 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	IYD	Q6PHW0	289 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	NAPRT	Q6XQN6	538 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	C3P1	Q6ZMU1	363 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	P3H2	Q8IVL5	708 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	NELFCD	Q8IXH7	590 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	CCDC65	Q8IXS2	484 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	CPSF7	Q8N684	471 aa	Known RBP	7.17	□□□□□ -1.26
CAST-231	ENST00000510245	SLC38A9	Q8NBW4	561 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	MYRIP	Q8NFW9	859 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	TMEM171	Q8WVE6	324 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	ASB5	Q8WWX0	329 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245		Q96MF0	132 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	HERPUD2	Q9BSE4	406 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	ALOXE3	Q9BYJ1	711 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	MMRN2	Q9H8L6	949 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	BEX4	Q9NWD9	120 aa	Predicted RBP	7.17	□□□□□ -1.26
CAST-231	ENST00000510245	DDIT4	Q9NX09	232 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	ANK2	Q01484	3957 aa		7.17	□□□□□ -1.26
CAST-231	ENST00000510245	KIR2DS5	A0A0G2JLQ3	304 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245		A0A0G2JNG1	304 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245		A0A1W2PS29	197 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	ILVBL	A1L0T0	632 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	DYTN	A2CJ06	578 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	SERINC4	A6NH21	518 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	UNC119B	A6NIH7	251 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	KIR2DS3	K7RE56	304 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	CYR61	O00622	381 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	SNX2	O60749	519 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	SRGAP2	O75044	1071 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	IGSF6	O95976	241 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	IGLV3-25	P01717	112 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	CSTB	P04080	98 aa	Known RBP	7.16	□□□□□ -1.26
CAST-231	ENST00000510245	TPO	P07202	933 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	CAPN1	P07384	714 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	TPH1	P17752	444 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	CAPZB	P47756	277 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	DCAF7	P61962	342 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	TUBB4B	P68371	445 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	CDK3	Q00526	305 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	TFF3	Q07654	80 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	MFAP5	Q13361	173 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	TUBB2A	Q13885	445 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	KIR2DS5	Q14953	304 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	ACOX1	Q15067	660 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	PFKFB4	Q16877	469 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	RILPL1	Q5EBL4	403 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	RBM20	Q5T481	1227 aa	Known RBP	7.16	□□□□□ -1.26
CAST-231	ENST00000510245	PRAMEF17	Q5VTA0	474 aa		7.16	□□□□□ -1.26
CAST-231	ENST00000510245	RGS7BP	Q6MZT1	257 aa	Predicted RBP	7.16	□□□□□ -1.26
CAST-231	ENST00000510245	PMF1	Q6P1K2	205 aa		7.16	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms