RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 RIC8BQ9NVN3 520 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 PAK5Q9P286 719 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 TINAGQ9UJW2 476 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 ANAPC5Q9UJX4 755 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 MKL2Q9ULH7 1088 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 KLF2Q9Y5W3 355 aaPredicted RBP12.65□□□□□ -0.38
DDX41-210ENST00000509576 NF1P21359 2839 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 ZNF407Q9C0G0 2248 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 CCL21O00585 134 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 PRAMEF2O60811 474 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 GAS8O95995 478 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 HEXBP07686 556 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 HTR1EP28566 365 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 IMPA1P29218 277 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 ZNF468Q5VIY5 522 aaPredicted RBP12.64□□□□□ -0.39
DDX41-210ENST00000509576 TTC23LQ6PF05 361 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 RIPOR1Q6ZS17 1223 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 FGD2Q7Z6J4 655 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 DENND6AQ8IWF6 608 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 SYCE1Q8N0S2 351 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 YIPF2Q9BWQ6 316 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 IL22Q9GZX6 179 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 DRC3Q9H069 523 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.64□□□□□ -0.39
DDX41-210ENST00000509576 TSPAN10Q9H1Z9 355 aaPredicted RBP12.64□□□□□ -0.39
DDX41-210ENST00000509576 MKKSQ9NPJ1 570 aaPredicted RBP12.64□□□□□ -0.39
DDX41-210ENST00000509576 C14orf105Q9NVL8 296 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 SOX13Q9UN79 622 aa12.64□□□□□ -0.39
DDX41-210ENST00000509576 CTAGE15A4D2H0 777 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 F8W8V4 182 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 SMAPO00193 183 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 RASAL1O95294 804 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 ERVK-10P10266 1014 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 PKMP14618 531 aaKnown RBP12.63□□□□□ -0.39
DDX41-210ENST00000509576 EZRP15311 586 aaKnown RBP12.63□□□□□ -0.39
DDX41-210ENST00000509576 IL1RNP18510 177 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 PTMSP20962 102 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 FDXRP22570 491 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 RPA3P35244 121 aaPredicted RBP12.63□□□□□ -0.39
DDX41-210ENST00000509576 PPARGP37231 505 aaPredicted RBP12.63□□□□□ -0.39
DDX41-210ENST00000509576 COILP38432 576 aaPredicted RBP12.63□□□□□ -0.39
DDX41-210ENST00000509576 KIR3DL1P43629 444 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 TERF1P54274 439 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 ADARP55265 1226 aaKnown RBP12.63□□□□□ -0.39
DDX41-210ENST00000509576 ZNF33BQ06732 778 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 KIF5AQ12840 1032 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 TSTA3Q13630 321 aaPredicted RBP12.63□□□□□ -0.39
DDX41-210ENST00000509576 TUBA3CQ13748 450 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 ANKRD20A4Q4UJ75 823 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 RNFT1Q5M7Z0 435 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 KIAA0930Q6ICG6 404 aaPredicted RBP12.63□□□□□ -0.39
DDX41-210ENST00000509576 TUBA3EQ6PEY2 450 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 MBOAT1Q6ZNC8 495 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 CTAGE6Q86UF2 777 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 CAND1Q86VP6 1230 aaKnown RBP12.63□□□□□ -0.39
DDX41-210ENST00000509576 ZNF227Q86WZ6 799 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 CRLF3Q8IUI8 442 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 CILP2Q8IUL8 1156 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 SIAH3Q8IW03 269 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 ZNF808Q8N4W9 903 aaPredicted RBP12.63□□□□□ -0.39
DDX41-210ENST00000509576 PHF12Q96QT6 1004 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 CYTH2Q99418 400 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 ABCF3Q9NUQ8 709 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 ANKRD10Q9NXR5 420 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 SEC14L3Q9UDX4 400 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 ZNF835Q9Y2P0 537 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 MTORP42345 2549 aa12.63□□□□□ -0.39
DDX41-210ENST00000509576 INTS1Q8N201 2190 aaKnown RBP12.63□□□□□ -0.39
DDX41-210ENST00000509576 DNAJC13O75165 2243 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 H7BY64 318 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 GFYI3L273 518 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 KPNA5O15131 536 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 LCMT2O60294 686 aaKnown RBP12.62□□□□□ -0.39
DDX41-210ENST00000509576 SLC19A2O60779 497 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 WFS1O76024 890 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 IPO7O95373 1038 aaKnown RBP12.62□□□□□ -0.39
DDX41-210ENST00000509576 B3GALT4O96024 378 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 ESR1P03372 595 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 C8orf89P0DMQ9 161 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 SKIV2L2P42285 1042 aaKnown RBP12.62□□□□□ -0.39
DDX41-210ENST00000509576 NPY2RP49146 381 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 NR0B1P51843 470 aaKnown RBP12.62□□□□□ -0.39
DDX41-210ENST00000509576 BASP1P80723 227 aaKnown RBP12.62□□□□□ -0.39
DDX41-210ENST00000509576 HSF1Q00613 529 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 RELAQ04206 551 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 FAM53BQ14153 422 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 ARHGAP19Q14CB8 494 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 CCNG2Q16589 344 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 ZNF766Q5HY98 468 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 SEL1L2Q5TEA6 688 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 MEI1Q5TIA1 1274 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 GARNL3Q5VVW2 1013 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 DRICH1Q6PGQ1 229 aaPredicted RBP12.62□□□□□ -0.39
DDX41-210ENST00000509576 TMEM207Q6UWW9 146 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 PIWIL4Q7Z3Z4 852 aaKnown RBP12.62□□□□□ -0.39
DDX41-210ENST00000509576 ANKRD37Q7Z713 158 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 PRELID2Q8N945 189 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 CCDC89Q8N998 374 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 ACBD4Q8NC06 268 aa12.62□□□□□ -0.39
DDX41-210ENST00000509576 KCT2Q8NC54 265 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms