RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 KLC1Q07866 573 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 CDC16Q13042 620 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 ZNF169Q14929 603 aaPredicted RBP10.37□□□□□ -0.75
RNF4-212ENST00000509258 TLR1Q15399 786 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 PPP1R7Q15435 360 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 PHKG1Q16816 387 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 MUM1Q2TAK8 710 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 PAQR3Q6TCH7 311 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 IGFL2Q6UWQ7 119 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 PRSS41Q7RTY9 318 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 VN1R4Q7Z5H5 301 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 KLHL7Q8IXQ5 586 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 PARP9Q8IXQ6 854 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 AMER3Q8N944 861 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 FBXO15Q8NCQ5 510 aaPredicted RBP10.37□□□□□ -0.75
RNF4-212ENST00000509258 OR11G2Q8NGC1 345 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 DNAJB14Q8TBM8 379 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 STT3BQ8TCJ2 826 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 EEF1AKMT1Q8WVE0 214 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 SLCO2A1Q92959 643 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 CNDP1Q96KN2 507 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 CCDC138Q96M89 665 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 EBNA1BP2Q99848 306 aaKnown RBP10.37□□□□□ -0.75
RNF4-212ENST00000509258 ZFYVE21Q9BQ24 234 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 LHPPQ9H008 270 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 ASIC3Q9UHC3 531 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 PCYOX1Q9UHG3 505 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 CDC14AQ9UNH5 594 aa10.37□□□□□ -0.75
RNF4-212ENST00000509258 MYO7BQ6PIF6 2116 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 CTAGE15A4D2H0 777 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 ZNF839A8K0R7 811 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 H7BY64 318 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 CES2O00748 559 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 PCDH17O14917 1159 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 LRRTM2O43300 516 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 EDN3P14138 238 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 FDXRP22570 491 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 CXCR2P25025 360 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 TNFRSF8P28908 595 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 ELK3P41970 407 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 TBPL1P62380 186 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 MAT1AQ00266 395 aaKnown RBP10.36□□□□□ -0.75
RNF4-212ENST00000509258 ARHGAP19Q14CB8 494 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 FASTKD3Q14CZ7 662 aaKnown RBP10.36□□□□□ -0.75
RNF4-212ENST00000509258 BBS9Q3SYG4 887 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 C1QL3Q5VWW1 255 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 FAM180AQ6UWF9 173 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 TMEM207Q6UWW9 146 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 UBE2R2Q712K3 238 aaPredicted RBP10.36□□□□□ -0.75
RNF4-212ENST00000509258 CTAGE6Q86UF2 777 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 CNTN4Q8IWV2 1026 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 CSNK1A1LQ8N752 337 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 GRHL3Q8TE85 626 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 GRK7Q8WTQ7 553 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 FAR1Q8WVX9 515 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 MIEF2Q96C03 454 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 CFAP36Q96G28 342 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 CABS1Q96KC9 395 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 PRAP1Q96NZ9 151 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 NAP1L3Q99457 506 aaPredicted RBP10.36□□□□□ -0.75
RNF4-212ENST00000509258 OLFM1Q99784 485 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 CRB3Q9BUF7 120 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 ZNF304Q9HCX3 659 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 FAM114A2Q9NRY5 505 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 KLHL42Q9P2K6 505 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 ZNF282Q9UDV7 671 aaPredicted RBP10.36□□□□□ -0.75
RNF4-212ENST00000509258 CHMP2BQ9UQN3 213 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 PDE10AQ9Y233 779 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 VPS9D1Q9Y2B5 631 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 PSAT1Q9Y617 370 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 PCNX1Q96RV3 2341 aa10.36□□□□□ -0.75
RNF4-212ENST00000509258 TEP1Q99973 2627 aaKnown RBP10.36□□□□□ -0.75
RNF4-212ENST00000509258 IGLV3-12A0A075B6K2 115 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 A0A0A6YYC8 382 aaPredicted RBP10.35□□□□□ -0.75
RNF4-212ENST00000509258 DYTNA2CJ06 578 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 OR2W5A6NFC9 320 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 I3L1I5 382 aaPredicted RBP10.35□□□□□ -0.75
RNF4-212ENST00000509258 TTI1O43156 1089 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 ZSCAN12O43309 604 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 HNRNPRO43390 633 aaKnown RBP10.35□□□□□ -0.75
RNF4-212ENST00000509258 JRKO75564 520 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 PIAS1O75925 651 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 KLHL18O94889 574 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 CCNDBP1O95273 360 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 HPP00738 406 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 ZGLP1P0C6A0 271 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 MYBL2P10244 700 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 COX6A1P12074 109 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 ACPPP15309 386 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 FBLP22087 321 aaKnown RBP10.35□□□□□ -0.75
RNF4-212ENST00000509258 HSD17B2P37059 387 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 NAA30Q147X3 362 aaPredicted RBP10.35□□□□□ -0.75
RNF4-212ENST00000509258 TTLL9Q3SXZ7 439 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 TEDDM1Q5T9Z0 273 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 ATG9BQ674R7 924 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 STEAP4Q687X5 459 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 HIBCHQ6NVY1 386 aaPredicted RBP10.35□□□□□ -0.75
RNF4-212ENST00000509258 ISLR2Q6UXK2 745 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 ANKMY2Q8IV38 441 aa10.35□□□□□ -0.75
RNF4-212ENST00000509258 ZC3H7AQ8IWR0 971 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms