RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 GABRR3A8MPY1 467 aa14□□□□□ -0.17
DDX41-208ENST00000507955 H0YAE9 185 aa14□□□□□ -0.17
DDX41-208ENST00000507955 hCG_2039718K7EN88 272 aa14□□□□□ -0.17
DDX41-208ENST00000507955 CLIC1O00299 241 aa14□□□□□ -0.17
DDX41-208ENST00000507955 SLC16A5O15375 505 aa14□□□□□ -0.17
DDX41-208ENST00000507955 MITFO75030 526 aaPredicted RBP14□□□□□ -0.17
DDX41-208ENST00000507955 THRBP10828 461 aa14□□□□□ -0.17
DDX41-208ENST00000507955 AQP1P29972 269 aa14□□□□□ -0.17
DDX41-208ENST00000507955 MLLT10P55197 1068 aa14□□□□□ -0.17
DDX41-208ENST00000507955 RPS13P62277 151 aaKnown RBP14□□□□□ -0.17
DDX41-208ENST00000507955 ACSM2AQ08AH3 577 aa14□□□□□ -0.17
DDX41-208ENST00000507955 NFE2L1Q14494 772 aa14□□□□□ -0.17
DDX41-208ENST00000507955 FAM78AQ5JUQ0 283 aa14□□□□□ -0.17
DDX41-208ENST00000507955 LDLRAP1Q5SW96 308 aa14□□□□□ -0.17
DDX41-208ENST00000507955 ACSM2BQ68CK6 577 aa14□□□□□ -0.17
DDX41-208ENST00000507955 ZNF773Q6PK81 442 aa14□□□□□ -0.17
DDX41-208ENST00000507955 TRMT11Q7Z4G4 463 aaKnown RBP14□□□□□ -0.17
DDX41-208ENST00000507955 GALNT5Q7Z7M9 940 aa14□□□□□ -0.17
DDX41-208ENST00000507955 GPR149Q86SP6 731 aa14□□□□□ -0.17
DDX41-208ENST00000507955 RASGRP3Q8IV61 690 aa14□□□□□ -0.17
DDX41-208ENST00000507955 MMAAQ8IVH4 418 aaKnown RBP14□□□□□ -0.17
DDX41-208ENST00000507955 ZNF547Q8IVP9 402 aa14□□□□□ -0.17
DDX41-208ENST00000507955 PLA2G15Q8NCC3 412 aa14□□□□□ -0.17
DDX41-208ENST00000507955 ZNF740Q8NDX6 193 aa14□□□□□ -0.17
DDX41-208ENST00000507955 SMG7Q92540 1137 aaKnown RBP14□□□□□ -0.17
DDX41-208ENST00000507955 SNX19Q92543 992 aa14□□□□□ -0.17
DDX41-208ENST00000507955 TESCQ96BS2 214 aa14□□□□□ -0.17
DDX41-208ENST00000507955 CSF3RQ99062 836 aa14□□□□□ -0.17
DDX41-208ENST00000507955 ACAT2Q9BWD1 397 aa14□□□□□ -0.17
DDX41-208ENST00000507955 RMND5AQ9H871 391 aa14□□□□□ -0.17
DDX41-208ENST00000507955 ABCG2Q9UNQ0 655 aa14□□□□□ -0.17
DDX41-208ENST00000507955 MAN2B2Q9Y2E5 1009 aa14□□□□□ -0.17
DDX41-208ENST00000507955 CXorf51AA0A1B0GTR3 108 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 HEPACAM2A8MVW5 462 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 E2F6O75461 281 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 AP2A2O94973 939 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 EEF1B2P24534 225 aaKnown RBP13.99□□□□□ -0.17
DDX41-208ENST00000507955 TBPL1P62380 186 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 NFATC3Q12968 1075 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 C9orf64Q5T6V5 341 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 ATG9BQ674R7 924 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 PDE12Q6L8Q7 609 aaKnown RBP13.99□□□□□ -0.17
DDX41-208ENST00000507955 MIPOL1Q8TD10 442 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 SP7Q8TDD2 431 aaPredicted RBP13.99□□□□□ -0.17
DDX41-208ENST00000507955 GIPC3Q8TF64 312 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 DTD2Q96FN9 168 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 CCDC138Q96M89 665 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 SH3GL1Q99961 368 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 ADNPQ9H2P0 1102 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 DNAJB9Q9UBS3 223 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 HS6ST1O60243 411 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 SCELO95171 688 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 C1orf105O95561 183 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 TGFB1P01137 390 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 CATP04040 527 aaKnown RBP13.99□□□□□ -0.17
DDX41-208ENST00000507955 HNRNPCP07910 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
DDX41-208ENST00000507955 C6P13671 934 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 WASP42768 502 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 GPR1P46091 355 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 NRIP1P48552 1158 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 PSMD7P51665 324 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 IL1RL1Q01638 556 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 MC1RQ01726 317 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 MEP1AQ16819 746 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 LIPJQ5W064 366 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 CELF5Q8N6W0 485 aaKnown RBP13.99□□□□□ -0.17
DDX41-208ENST00000507955 MBOAT4Q96T53 435 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 LHPPQ9H008 270 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 AASDHPPTQ9NRN7 309 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 TM7SF3Q9NS93 570 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 SPATA6Q9NWH7 488 aaPredicted RBP13.99□□□□□ -0.17
DDX41-208ENST00000507955 PCDHGA8Q9Y5G5 932 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 PCM1Q15154 2024 aa13.99□□□□□ -0.17
DDX41-208ENST00000507955 GNG14A0A1W2PPG7 69 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 HTR1AP08908 422 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 ANXA4P09525 319 aaPredicted RBP13.98□□□□□ -0.17
DDX41-208ENST00000507955 PRPH2P23942 346 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 TTKP33981 857 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 GRSF1Q12849 480 aaKnown RBP eCLIP13.98□□□□□ -0.17
DDX41-208ENST00000507955 GTF2H3Q13889 308 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 GAB4Q2WGN9 574 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 R3HCC1LQ7Z5L2 792 aaKnown RBP13.98□□□□□ -0.17
DDX41-208ENST00000507955 ZNF554Q86TJ5 538 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 BPIFB6Q8NFQ5 453 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 OR4K1Q8NGD4 311 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 COQ10AQ96MF6 247 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 TMEM121BQ9BXQ6 578 aaPredicted RBP13.98□□□□□ -0.17
DDX41-208ENST00000507955 OR51B5Q9H339 312 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 WBP1LQ9NX94 342 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 SH3BP4Q9P0V3 963 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 PRKAG2Q9UGJ0 569 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 CORINQ9Y5Q5 1042 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 DGKBQ9Y6T7 804 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 SPEGQ15772 3267 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 FAM220BPB1ANY3 271 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 BOLA2-SMG1P6H3BVE0 249 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 J3QRK9 145 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 LZTS3O60299 673 aaPredicted RBP13.98□□□□□ -0.17
DDX41-208ENST00000507955 SEC14L2O76054 403 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 KCNK5O95279 499 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms