RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 SNX20Q7Z614 316 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 GPALPP1Q8IXQ4 340 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 OR10A6Q8NH74 314 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 LPPQ93052 612 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 GPR137Q96N19 417 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 SPNS1Q9H2V7 528 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 EVA1BQ9NVM1 165 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 VAPAQ9P0L0 249 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 COX16Q9P0S2 106 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 SRRDQ9UH36 339 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 TIMM13Q9Y5L4 95 aaPredicted RBP12.9□□□□□ -0.35
LETM1-203ENST00000505551 NUP205Q92621 2012 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 CIB4A0PJX0 185 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 CHURC1-FNTBB4DL54 471 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 PI15O43692 258 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 ADAMTS4O75173 837 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 CDKN2DP55273 166 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 OLR1P78380 273 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 AANATQ16613 207 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 TATDN3Q17R31 274 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 INTS6LQ5JSJ4 861 aaKnown RBP12.89□□□□□ -0.35
LETM1-203ENST00000505551 C9orf57Q5W0N0 161 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 PGBD5Q8N414 524 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 OR7D4Q8NG98 312 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 OR2T11Q8NH01 316 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 APOL5Q9BWW9 433 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 ALG5Q9Y673 324 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 CLDN5O00501 218 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 VPS26AO75436 327 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 JCHAINP01591 159 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 HEXBP07686 556 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 CD1DP15813 335 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 RPL34P49207 117 aaKnown RBP12.89□□□□□ -0.35
LETM1-203ENST00000505551 CYP4F3Q08477 520 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 HKDC1Q2TB90 917 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 GLYR1Q49A26 553 aaPredicted RBP12.89□□□□□ -0.35
LETM1-203ENST00000505551 TYW3Q6IPR3 259 aaKnown RBP12.89□□□□□ -0.35
LETM1-203ENST00000505551 FAM126BQ8IXS8 530 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 CPA6Q8N4T0 437 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 DNAJC22Q8N4W6 341 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 KCT2Q8NC54 265 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 TRPV1Q8NER1 839 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 WNT8BQ93098 351 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 AP2M1Q96CW1 435 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 ZNF599Q96NL3 588 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 OLA1Q9NTK5 396 aaKnown RBP12.89□□□□□ -0.35
LETM1-203ENST00000505551 MIOSQ9NXC5 875 aa12.89□□□□□ -0.35
LETM1-203ENST00000505551 C17orf102A2RUQ5 167 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 CD3EAPO15446 510 aaKnown RBP12.88□□□□□ -0.35
LETM1-203ENST00000505551 CREG1O75629 220 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 PPM1BO75688 479 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 PTHP01270 115 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 CSF2P04141 144 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 CSF3P09919 207 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 HOXB1P14653 301 aaPredicted RBP12.88□□□□□ -0.35
LETM1-203ENST00000505551 RAC2P15153 192 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 TRIM23P36406 574 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 PSPHP78330 225 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 PITX1P78337 314 aaPredicted RBP12.88□□□□□ -0.35
LETM1-203ENST00000505551 RPP38P78345 283 aaKnown RBP12.88□□□□□ -0.35
LETM1-203ENST00000505551 UBE3AQ05086 875 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 KCNC3Q14003 757 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 PFKFB4Q16877 469 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 DCAF4L1Q3SXM0 396 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 TIMM50Q3ZCQ8 353 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 TEX261Q6UWH6 196 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 GPAT4Q86UL3 456 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 JAZF1Q86VZ6 243 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 P3H2Q8IVL5 708 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 LAX1Q8IWV1 398 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 POP5Q969H6 163 aaKnown RBP12.88□□□□□ -0.35
LETM1-203ENST00000505551 HYLS1Q96M11 299 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 COL21A1Q96P44 957 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 TSEN34Q9BSV6 310 aaKnown RBP12.88□□□□□ -0.35
LETM1-203ENST00000505551 TMEM245Q9H330 911 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 IKZF5Q9H5V7 419 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 CATSPERBQ9H7T0 1116 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 IL1RAPQ9NPH3 570 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 PAK6Q9NQU5 681 aaPredicted RBP12.88□□□□□ -0.35
LETM1-203ENST00000505551 HEBP1Q9NRV9 189 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 CPNE7Q9UBL6 633 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 GABRQQ9UN88 632 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 U3KQ87 197 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 SMIM35A0A1B0GVV1 85 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 FAM72CH0Y354 149 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 SMLR1H3BR10 107 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 BTN3A3O00478 584 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 RGS5O15539 181 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 CRCPO75575 148 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 PDE9AO76083 593 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 GNALP38405 381 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 ARHGDIAP52565 204 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 MAB21L1Q13394 359 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 C6orf136Q5SQH8 315 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 FAM72AQ5TYM5 149 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 SAXO2Q658L1 398 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 FAM72DQ6L9T8 149 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 C17orf99Q6UX52 265 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 COMMD7Q86VX2 200 aa12.88□□□□□ -0.35
LETM1-203ENST00000505551 FAM72BQ86X60 149 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms