RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 PLD3Q8IV08 490 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 DENND6AQ8IWF6 608 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 NOA1Q8NC60 698 aaKnown RBP17.61■□□□□ 0.41
PRKCB-209ENST00000498058 BRIX1Q8TDN6 353 aaKnown RBP17.61■□□□□ 0.41
PRKCB-209ENST00000498058 SNF8Q96H20 258 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 TAAR6Q96RI8 345 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 SLX1AQ9BQ83 275 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 LRRC1Q9BTT6 524 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 RRAGDQ9NQL2 400 aaPredicted RBP17.61■□□□□ 0.41
PRKCB-209ENST00000498058 PTGFRNQ9P2B2 879 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 TRPC4Q9UBN4 977 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 MYO9AB2RTY4 2548 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 CREBBPQ92793 2442 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 IGHV1-45A0A0A0MS14 117 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 A0A0A6YYC8 382 aaPredicted RBP17.6■□□□□ 0.41
PRKCB-209ENST00000498058 A0A1W2PQ72 361 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 E7ENX8 843 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 H3BMM5 538 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 I3L1I5 382 aaPredicted RBP17.6■□□□□ 0.41
PRKCB-209ENST00000498058 AP3B1O00203 1094 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 SLC16A8O95907 504 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 F10P00742 488 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 STATHP02808 62 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 ERVK-10P10266 1014 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 EDN3P14138 238 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 SARNPP82979 210 aaKnown RBP17.6■□□□□ 0.41
PRKCB-209ENST00000498058 MAT1AQ00266 395 aaKnown RBP17.6■□□□□ 0.41
PRKCB-209ENST00000498058 CDK16Q00536 496 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 TAP2Q03519 686 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 PRDX1Q06830 199 aaKnown RBP17.6■□□□□ 0.41
PRKCB-209ENST00000498058 CALCOCO2Q13137 446 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 CTBP1Q13363 440 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 ARHGAP19Q14CB8 494 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 ZNF324BQ6AW86 544 aaPredicted RBP17.6■□□□□ 0.41
PRKCB-209ENST00000498058 NDUFAF7Q7L592 441 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 KBTBD2Q8IY47 623 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 SIRT6Q8N6T7 355 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 OR1N1Q8NGS0 311 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 TRIM51Q9BSJ1 452 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 FBXO6Q9NRD1 293 aaPredicted RBP17.6■□□□□ 0.41
PRKCB-209ENST00000498058 SCN3AQ9NY46 2000 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 MYO7BQ6PIF6 2116 aa17.6■□□□□ 0.41
PRKCB-209ENST00000498058 SCN2AQ99250 2005 aa17.59■□□□□ 0.41
PRKCB-209ENST00000498058 NSG1A0A0A6YYJ2 146 aa17.59■□□□□ 0.41
PRKCB-209ENST00000498058 ZCWPW2A0A1B0GU75 182 aa17.59■□□□□ 0.41
PRKCB-209ENST00000498058 HAT1O14929 419 aa17.59■□□□□ 0.41
PRKCB-209ENST00000498058 USP1O94782 785 aa17.59■□□□□ 0.41
PRKCB-209ENST00000498058 TDGF1P3P51864 188 aa17.59■□□□□ 0.41
PRKCB-209ENST00000498058 PCOLCEQ15113 449 aa17.59■□□□□ 0.41
PRKCB-209ENST00000498058 TEX35Q5T0J7 233 aa17.59■□□□□ 0.41
PRKCB-209ENST00000498058 ZNF470Q6ECI4 717 aa17.59■□□□□ 0.41
PRKCB-209ENST00000498058 RPUSD3Q6P087 351 aaKnown RBP17.59■□□□□ 0.41
PRKCB-209ENST00000498058 ZC3H7AQ8IWR0 971 aaKnown RBP17.59■□□□□ 0.41
PRKCB-209ENST00000498058 PPIL6Q8IXY8 311 aa17.59■□□□□ 0.41
PRKCB-209ENST00000498058 ZNF669Q96BR6 464 aaPredicted RBP17.59■□□□□ 0.41
PRKCB-209ENST00000498058 MMABQ96EY8 250 aaPredicted RBP17.59■□□□□ 0.41
PRKCB-209ENST00000498058 YIPF2Q9BWQ6 316 aa17.59■□□□□ 0.41
PRKCB-209ENST00000498058 ABCF3Q9NUQ8 709 aa17.59■□□□□ 0.41
PRKCB-209ENST00000498058 LOC102723996A0A087X1L8 192 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 E5RI56 91 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 GFYI3L273 518 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 DNALI1O14645 258 aaPredicted RBP17.58■□□□□ 0.4
PRKCB-209ENST00000498058 JRKO75564 520 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 CATP04040 527 aaKnown RBP17.58■□□□□ 0.4
PRKCB-209ENST00000498058 ITGAMP11215 1152 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 TNFSF10P50591 281 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 C1QL3Q5VWW1 255 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 NEK10Q6ZWH5 1172 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 ASB11Q8WXH4 323 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 MVB12AQ96EY5 273 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 VPS50Q96JG6 964 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 TRIM31Q9BZY9 425 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 TGIF2Q9GZN2 237 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 WHRNQ9P202 907 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 CDC14AQ9UNH5 594 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 LRBAP50851 2863 aa17.58■□□□□ 0.4
PRKCB-209ENST00000498058 FAM237BA0A1B0GVD1 139 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 GOLGA8MH3BSY2 632 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 ZG16O60844 167 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 VPS26AO75436 327 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 WISP2O76076 250 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 SERPINA7P05543 415 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 HEXBP07686 556 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 IMPA1P29218 277 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 KCNK10P57789 538 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 ARG2P78540 354 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 CAV1Q03135 178 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 NAA25Q14CX7 972 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 MORF4L2Q15014 288 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 GARNL3Q5VVW2 1013 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 DUPD1Q68J44 220 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 CASC4Q6P4E1 433 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 TMEM205Q6UW68 189 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 PRSS41Q7RTY9 318 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 VN1R4Q7Z5H5 301 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 FBXO15Q8NCQ5 510 aaPredicted RBP17.57■□□□□ 0.4
PRKCB-209ENST00000498058 GPR21Q99679 349 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 MACROD1Q9BQ69 325 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 FAM129AQ9BZQ8 928 aa17.57■□□□□ 0.4
PRKCB-209ENST00000498058 FAM114A2Q9NRY5 505 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms