RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 CCR8P51685 355 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 CCNG1P51959 295 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 IRF8Q02556 426 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 TRA2AQ13595 282 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPN7-218ENST00000496197 PUM1Q14671 1186 aaKnown RBP eCLIP12.92□□□□□ -0.345e-6■□□□□ 10.2
PTPN7-218ENST00000496197 ARL13AQ5H913 290 aaPredicted RBP12.92□□□□□ -0.34
PTPN7-218ENST00000496197 TCHHL1Q5QJ38 904 aaPredicted RBP12.92□□□□□ -0.34
PTPN7-218ENST00000496197 VN1R5Q7Z5H4 357 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 KMT5CQ86Y97 462 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 L3MBTL4Q8NA19 623 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 PTCD3Q96EY7 689 aaKnown RBP12.92□□□□□ -0.34
PTPN7-218ENST00000496197 TCTN2Q96GX1 697 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 DEPDC7Q96QD5 511 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 OR2A5Q96R48 311 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 ZNF382Q96SR6 550 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 MACROD1Q9BQ69 325 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 ACTR8Q9H981 624 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 PDE7BQ9NP56 450 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 FAM53CQ9NYF3 392 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 ANKMY1Q9P2S6 941 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 SNX7Q9UNH6 387 aa12.92□□□□□ -0.34
PTPN7-218ENST00000496197 EFCAB7A8K855 629 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 P2RX6O15547 441 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 NPHS1O60500 1241 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 TBX6O95947 436 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-218ENST00000496197 SERPINE1P05121 402 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 EZRP15311 586 aaKnown RBP12.91□□□□□ -0.34
PTPN7-218ENST00000496197 ID4P47928 161 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 BST1Q10588 318 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 LCP2Q13094 533 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 RCN2Q14257 317 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 TBCCQ15814 346 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 CFAP157Q5JU67 520 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 PRAMEF17Q5VTA0 474 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 GRHL2Q6ISB3 625 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 TMPRSS7Q7RTY8 843 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 VN1R4Q7Z5H5 301 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 TMPRSS12Q86WS5 348 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTPN7-218ENST00000496197 ATP6V1E2Q96A05 226 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 ZNF501Q96CX3 271 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-218ENST00000496197 LIN37Q96GY3 246 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-218ENST00000496197 SORT1Q99523 831 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 ZFYVE21Q9BQ24 234 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 SARGQ9BW04 601 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 CAPS2Q9BXY5 557 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 AICDAQ9GZX7 198 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 DRC3Q9H069 523 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 EHD1Q9H4M9 534 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 MID1IP1Q9NPA3 183 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 STARD5Q9NSY2 213 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 INTS9Q9NV88 658 aaKnown RBP12.91□□□□□ -0.34
PTPN7-218ENST00000496197 WASF3Q9UPY6 502 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 LOXL2Q9Y4K0 774 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 PCDHGA4Q9Y5G9 962 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 TRBC2A0A5B9 178 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 TMEM233B4DJY2 109 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 FFAR3O14843 346 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 HGSO14964 777 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-218ENST00000496197 GPR42O15529 346 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 OR1F1O43749 312 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 TIAF1O95411 115 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 CLDN9O95484 217 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 OTCP00480 354 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 JUPP14923 745 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 SPINK2P20155 84 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 HRH2P25021 359 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 ARL1P40616 181 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-218ENST00000496197 SCTRP47872 440 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 HTR6P50406 440 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 CYP4F2P78329 520 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 GPS2Q13227 327 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 CPSF6Q16630 551 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTPN7-218ENST00000496197 LIPJQ5W064 366 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 CLEC6AQ6EIG7 209 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 GPRIN3Q6ZVF9 776 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 MILR1Q7Z6M3 343 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 CUZD1Q86UP6 607 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 MYLK4Q86YV6 388 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-218ENST00000496197 CDYL2Q8N8U2 506 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 AGBL5Q8NDL9 886 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 OR1L3Q8NH93 324 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 AGR3Q8TD06 166 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 CNDP1Q96KN2 507 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 OR6C1Q96RD1 312 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 CTRCQ99895 268 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 CHRNA10Q9GZZ6 450 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 FARSBQ9NSD9 589 aaKnown RBP12.91□□□□□ -0.34
PTPN7-218ENST00000496197 SATB2Q9UPW6 733 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 TIMM22Q9Y584 194 aa12.91□□□□□ -0.34
PTPN7-218ENST00000496197 SCN3AQ9NY46 2000 aa12.9□□□□□ -0.34
PTPN7-218ENST00000496197 TMEM150CB9EJG8 249 aa12.9□□□□□ -0.34
PTPN7-218ENST00000496197 H0YGG7 62 aa12.9□□□□□ -0.34
PTPN7-218ENST00000496197 UGDHO60701 494 aa12.9□□□□□ -0.34
PTPN7-218ENST00000496197 SNNO75324 88 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-218ENST00000496197 MED26O95402 600 aa12.9□□□□□ -0.34
PTPN7-218ENST00000496197 ESRRBO95718 433 aa12.9□□□□□ -0.34
PTPN7-218ENST00000496197 MLYCDO95822 493 aa12.9□□□□□ -0.34
PTPN7-218ENST00000496197 CAPN1P07384 714 aa12.9□□□□□ -0.34
PTPN7-218ENST00000496197 CSTF2P33240 577 aaKnown RBP eCLIP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms