RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 CABS1Q96KC9 395 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 ZNF48Q96MX3 618 aaPredicted RBP4.45□□□□□ -1.7
RBM39-240ENST00000495293 PSKH2Q96QS6 385 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 NUDCD1Q96RS6 583 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 FMO2Q99518 471 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 SLC17A9Q9BYT1 436 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 GAREM1Q9H706 876 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 PDFQ9HBH1 243 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 TM9SF3Q9HD45 589 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 NT5MQ9NPB1 228 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 HOMER3Q9NSC5 361 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 ETNK2Q9NVF9 386 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 RBM22Q9NW64 420 aaKnown RBP eCLIP4.45□□□□□ -1.74e-9■■■■■ 39.6
RBM39-240ENST00000495293 SMARCAL1Q9NZC9 954 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 EHD3Q9NZN3 535 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 SEPT10Q9P0V9 454 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 XPR1Q9UBH6 696 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 CPNE7Q9UBL6 633 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 GRHPRQ9UBQ7 328 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 TTC7AQ9ULT0 858 aaPredicted RBP4.45□□□□□ -1.7
RBM39-240ENST00000495293 PACSIN2Q9UNF0 486 aaPredicted RBP4.45□□□□□ -1.7
RBM39-240ENST00000495293 MED16Q9Y2X0 877 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 NYNRINQ9P2P1 1898 aaKnown RBP4.45□□□□□ -1.7
RBM39-240ENST00000495293 CACNA1HO95180 2353 aa4.45□□□□□ -1.7
RBM39-240ENST00000495293 DYTNA2CJ06 578 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 IGLON5A6NGN9 336 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 AGPSO00116 658 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 TLR4O00206 839 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 VILLO15195 856 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 LATO43561 262 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 MFSD11O43934 449 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 SNX2O60749 519 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 SOCS5O75159 536 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 PIGNO95427 931 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 GAS8O95995 478 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 JCHAINP01591 159 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 KRT14P02533 472 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 HNRNPCP07910 306 aaKnown RBP eCLIP4.44□□□□□ -1.78e-17■□□□□ 9.4
RBM39-240ENST00000495293 THEGLP0DJG4 465 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 HSD17B3P37058 310 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 RABIFP47224 123 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 RXRGP48443 463 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 CCT8P50990 548 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 ARSEP51690 589 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 THOP1P52888 689 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 METAP1P53582 386 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 PMS2P54278 862 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 ARL4CP56559 192 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 LOXL3P58215 753 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 MAXP61244 160 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 GBE1Q04446 702 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 PPIDQ08752 370 aaKnown RBP4.44□□□□□ -1.7
RBM39-240ENST00000495293 GRIK2Q13002 908 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 ETFDHQ16134 617 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 PFKFB4Q16877 469 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 KIF19Q2TAC6 998 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 HLA-BQ31612 363 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 ARMC12Q5T9G4 340 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 SLC9A4Q6AI14 798 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 TTC19Q6DKK2 380 aaPredicted RBP4.44□□□□□ -1.7
RBM39-240ENST00000495293 LAYNQ6UX15 382 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 MFSD7Q6UXD7 560 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 C1orf122Q6ZSJ8 110 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 PARS2Q7L3T8 475 aaKnown RBP4.44□□□□□ -1.7
RBM39-240ENST00000495293 CCDC91Q7Z6B0 441 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 IQCHQ86VS3 1027 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 CAMK1DQ8IU85 385 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 IQCKQ8N0W5 287 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 SLC15A4Q8N697 577 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 TEX26Q8N6G2 289 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 PQLC3Q8N755 202 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 PLD5Q8N7P1 536 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 CCDC89Q8N998 374 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 ATG16L2Q8NAA4 619 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 ZNF473Q8WTR7 871 aaKnown RBP4.44□□□□□ -1.7
RBM39-240ENST00000495293 TFB1MQ8WVM0 346 aaKnown RBP4.44□□□□□ -1.7
RBM39-240ENST00000495293 ASB12Q8WXK4 309 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 MAML1Q92585 1016 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 KLK6Q92876 244 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 ZNF566Q969W8 418 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 FAM131CQ96AQ9 280 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 FAF2Q96CS3 445 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 HDAC11Q96DB2 347 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 RMDN1Q96DB5 314 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 TSGA13Q96PP4 275 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 LENG8Q96PV6 779 aaPredicted RBP4.44□□□□□ -1.7
RBM39-240ENST00000495293 CCT8L2Q96SF2 557 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 VAT1Q99536 393 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 SEMA3CQ99985 751 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 SELENOSQ9BQE4 189 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 MGME1Q9BQP7 344 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 WRAP53Q9BUR4 548 aaKnown RBP4.44□□□□□ -1.7
RBM39-240ENST00000495293 ADGRE3Q9BY15 652 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 TRIM54Q9BYV2 358 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 TRIM31Q9BZY9 425 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 CARD9Q9H257 536 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 DPH5Q9H2P9 285 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 RABEP2Q9H5N1 569 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 CXorf36Q9H7Y0 433 aa4.44□□□□□ -1.7
RBM39-240ENST00000495293 TMBIM4Q9HC24 238 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms