RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TAAR6Q96RI8 345 aa22.04■■□□□ 1.12
COL27A1-208ENST00000494780 RNF32Q9H0A6 362 aa22.04■■□□□ 1.12
COL27A1-208ENST00000494780 MKL2Q9ULH7 1088 aa22.04■■□□□ 1.12
COL27A1-208ENST00000494780 MED16Q9Y2X0 877 aa22.04■■□□□ 1.12
COL27A1-208ENST00000494780 SDR42E2A6NKP2 422 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 GFYI3L273 518 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 HAT1O14929 419 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 P2RX6O15547 441 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 ZBTB14O43829 449 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 ZG16O60844 167 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 KRT14P02533 472 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 SKIV2L2P42285 1042 aaKnown RBP22.03■■□□□ 1.12
COL27A1-208ENST00000494780 AVPR1BP47901 424 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 TDGF1P3P51864 188 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 CUL1Q13616 776 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 PCOLCEQ15113 449 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 SYT16Q17RD7 645 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 C1QL3Q5VWW1 255 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 ANKRD22Q5VYY1 191 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 CYHR1Q6ZMK1 362 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 DENND6AQ8IWF6 608 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 NR4A3Q92570 626 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.03■■□□□ 1.12
COL27A1-208ENST00000494780 XAB2Q9HCS7 855 aaKnown RBP22.03■■□□□ 1.12
COL27A1-208ENST00000494780 FBXO6Q9NRD1 293 aaPredicted RBP22.03■■□□□ 1.12
COL27A1-208ENST00000494780 ABCF3Q9NUQ8 709 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 DHRS7Q9Y394 339 aa22.03■■□□□ 1.12
COL27A1-208ENST00000494780 CELA2AP08217 269 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 HRH2P25021 359 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 CXCR5P32302 372 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 CTBP1Q13363 440 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 THEMIS2Q5TEJ8 643 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 ZNF549Q6P9A3 640 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 FJX1Q86VR8 437 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 LMNTD2Q8IXW0 634 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 MCUQ8NE86 351 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 RELTQ969Z4 430 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 IMMP1LQ96LU5 166 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 TUBB6Q9BUF5 446 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 TMEM184CQ9NVA4 438 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 ENTPD4Q9Y227 616 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 COMMD10Q9Y6G5 202 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 CELSR2Q9HCU4 2923 aa22.02■■□□□ 1.12
COL27A1-208ENST00000494780 ZCWPW2A0A1B0GU75 182 aa22.01■■□□□ 1.11
COL27A1-208ENST00000494780 H0YIG0 161 aa22.01■■□□□ 1.11
COL27A1-208ENST00000494780 H7BY64 318 aa22.01■■□□□ 1.11
COL27A1-208ENST00000494780 WDPCPO95876 746 aa22.01■■□□□ 1.11
COL27A1-208ENST00000494780 CYC1P08574 325 aa22.01■■□□□ 1.11
COL27A1-208ENST00000494780 C8orf89P0DMQ9 161 aa22.01■■□□□ 1.11
COL27A1-208ENST00000494780 ITGAMP11215 1152 aa22.01■■□□□ 1.11
COL27A1-208ENST00000494780 IMPA1P29218 277 aa22.01■■□□□ 1.11
COL27A1-208ENST00000494780 MAT1AQ00266 395 aaKnown RBP22.01■■□□□ 1.11
COL27A1-208ENST00000494780 HIBCHQ6NVY1 386 aaPredicted RBP22.01■■□□□ 1.11
COL27A1-208ENST00000494780 PLD3Q8IV08 490 aa22.01■■□□□ 1.11
COL27A1-208ENST00000494780 METTL21AQ8WXB1 218 aa22.01■■□□□ 1.11
COL27A1-208ENST00000494780 PRAP1Q96NZ9 151 aa22.01■■□□□ 1.11
COL27A1-208ENST00000494780 KCNE1BA0A087WTH5 132 aa22■■□□□ 1.11
COL27A1-208ENST00000494780 EIF3FO00303 357 aaPredicted RBP22■■□□□ 1.11
COL27A1-208ENST00000494780 NSA2O95478 260 aaKnown RBP22■■□□□ 1.11
COL27A1-208ENST00000494780 F7P08709 466 aaPredicted RBP22■■□□□ 1.11
COL27A1-208ENST00000494780 MYBL2P10244 700 aa22■■□□□ 1.11
COL27A1-208ENST00000494780 EFNA3P52797 238 aa22■■□□□ 1.11
COL27A1-208ENST00000494780 KCNK10P57789 538 aa22■■□□□ 1.11
COL27A1-208ENST00000494780 ABHD17BQ5VST6 288 aa22■■□□□ 1.11
COL27A1-208ENST00000494780 UBE2R2Q712K3 238 aaPredicted RBP22■■□□□ 1.11
COL27A1-208ENST00000494780 SUN3Q8TAQ9 357 aa22■■□□□ 1.11
COL27A1-208ENST00000494780 CD200R1Q8TD46 325 aa22■■□□□ 1.11
COL27A1-208ENST00000494780 CALML6Q8TD86 181 aa22■■□□□ 1.11
COL27A1-208ENST00000494780 GPR21Q99679 349 aa22■■□□□ 1.11
COL27A1-208ENST00000494780 CCDC177Q9NQR7 707 aaPredicted RBP22■■□□□ 1.11
COL27A1-208ENST00000494780 ABI3Q9P2A4 366 aa22■■□□□ 1.11
COL27A1-208ENST00000494780 TEKT2Q9UIF3 430 aa22■■□□□ 1.11
COL27A1-208ENST00000494780 CPAMD8Q8IZJ3 1885 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 OR5H15A6NDH6 313 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 HNRNPRO43390 633 aaKnown RBP21.99■■□□□ 1.11
COL27A1-208ENST00000494780 KIF5CO60282 957 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 F10P00742 488 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 CRYABP02511 175 aaKnown RBP21.99■■□□□ 1.11
COL27A1-208ENST00000494780 SLC1A2P43004 574 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 RPS15AP62244 130 aaKnown RBP21.99■■□□□ 1.11
COL27A1-208ENST00000494780 LONRF1Q17RB8 773 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 TTC27Q6P3X3 843 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 GFRALQ6UXV0 394 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 VN1R4Q7Z5H5 301 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 CPNE9Q8IYJ1 553 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 OR9A4Q8NGU2 314 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 DNAJB8Q8NHS0 232 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 MCOLN3Q8TDD5 553 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 THAP11Q96EK4 314 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 SERPINB12Q96P63 405 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 VN1R1Q9GZP7 353 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 PCBD2Q9H0N5 130 aa21.99■■□□□ 1.11
COL27A1-208ENST00000494780 C20orf96Q9NUD7 363 aaPredicted RBP21.99■■□□□ 1.11
COL27A1-208ENST00000494780 CRYBG3Q68DQ2 2970 aa21.98■■□□□ 1.11
COL27A1-208ENST00000494780 GOLGA8MH3BSY2 632 aa21.98■■□□□ 1.11
COL27A1-208ENST00000494780 RASAL1O95294 804 aa21.98■■□□□ 1.11
COL27A1-208ENST00000494780 PTK6Q13882 451 aa21.98■■□□□ 1.11
COL27A1-208ENST00000494780 LRRC8EQ6NSJ5 796 aa21.98■■□□□ 1.11
COL27A1-208ENST00000494780 PIWIL4Q7Z3Z4 852 aaKnown RBP21.98■■□□□ 1.11
COL27A1-208ENST00000494780 SPNS2Q8IVW8 549 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms