RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 FFAR3O14843 346 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 GPR42O15529 346 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 RFPL1O75677 317 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 ALBP02768 609 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 SLC35E2BP0CK96 405 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 CD1DP15813 335 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 SLC6A12P48065 614 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 CDKL1Q00532 357 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 MEF2AQ02078 507 aaPredicted RBP12.99□□□□□ -0.33
PDCD11-206ENST00000493610 USP10Q14694 798 aaKnown RBP12.99□□□□□ -0.33
PDCD11-206ENST00000493610 OR4D1Q15615 310 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 FAM214AQ32MH5 1076 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 COLEC12Q5KU26 742 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 CATSPEREQ5SY80 951 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 THEMIS2Q5TEJ8 643 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 CMC1Q7Z7K0 106 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 LAPTM4BQ86VI4 370 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 PTRH1Q86Y79 214 aaKnown RBP12.99□□□□□ -0.33
PDCD11-206ENST00000493610 PPM1NQ8N819 430 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 C9orf43Q8TAL5 461 aaPredicted RBP12.99□□□□□ -0.33
PDCD11-206ENST00000493610 NEIL2Q969S2 332 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 RHBDF1Q96CC6 855 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 MOCOSQ96EN8 888 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 TMEM79Q9BSE2 394 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 AICDAQ9GZX7 198 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 PCBD2Q9H0N5 130 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 ING2Q9H160 280 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 WDR54Q9H977 334 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 GPAMQ9HCL2 828 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 NDOR1Q9UHB4 597 aa12.99□□□□□ -0.33
PDCD11-206ENST00000493610 SPENQ96T58 3664 aaKnown RBP12.99□□□□□ -0.33
PDCD11-206ENST00000493610 PYCARD-AS1I3L0S3 204 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 CCDC166P0CW27 439 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 SFTPCP11686 197 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 EPORP19235 508 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 OTX2P32243 289 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 SLC26A3P40879 764 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 FOLR3P41439 243 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 GDF5P43026 501 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 SYT16Q17RD7 645 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 MUM1Q2TAK8 710 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 GRTP1Q5TC63 336 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 CAPN13Q6MZZ7 669 aaPredicted RBP12.98□□□□□ -0.33
PDCD11-206ENST00000493610 TMEM214Q6NUQ4 689 aaKnown RBP12.98□□□□□ -0.33
PDCD11-206ENST00000493610 TCTN3Q6NUS6 607 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 SHISA6Q6ZSJ9 500 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 C17orf64Q86WR6 236 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 PDSS2Q86YH6 399 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 KCT2Q8NC54 265 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 CDKL2Q92772 493 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 ALKBH8Q96BT7 664 aaKnown RBP12.98□□□□□ -0.33
PDCD11-206ENST00000493610 C17orf62Q9BQA9 187 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 NUDT9Q9BW91 350 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 CDC42EP4Q9H3Q1 356 aaKnown RBP12.98□□□□□ -0.33
PDCD11-206ENST00000493610 SOX17Q9H6I2 414 aaPredicted RBP12.98□□□□□ -0.33
PDCD11-206ENST00000493610 ZNF304Q9HCX3 659 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 IGSF5Q9NSI5 407 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 ASB1Q9Y576 335 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 HS3ST3B1Q9Y662 390 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 DOCK10Q96BY6 2186 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 SCN3AQ9NY46 2000 aa12.98□□□□□ -0.33
PDCD11-206ENST00000493610 GCN1Q92616 2671 aaKnown RBP12.97□□□□□ -0.33
PDCD11-206ENST00000493610 A0A0A6YYC8 382 aaPredicted RBP12.97□□□□□ -0.33
PDCD11-206ENST00000493610 C4orf51C9J302 202 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 I3L1I5 382 aaPredicted RBP12.97□□□□□ -0.33
PDCD11-206ENST00000493610 DNAJB6O75190 326 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 ALOX12BO75342 701 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 TUBB4AP04350 444 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 HIST1H2AGP0C0S8 130 aaPredicted RBP12.97□□□□□ -0.33
PDCD11-206ENST00000493610 CTAGE8P0CG41 777 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 HIST1H2ADP20671 130 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 CCND1P24385 295 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 HRH2P25021 359 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 STX2P32856 288 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 CCL11P51671 97 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 RAB10P61026 200 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 RPS15AP62244 130 aaKnown RBP12.97□□□□□ -0.33
PDCD11-206ENST00000493610 HYAL2Q12891 473 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 TGFBIQ15582 683 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 LACTB2Q53H82 288 aaPredicted RBP12.97□□□□□ -0.33
PDCD11-206ENST00000493610 FBXO48Q5FWF7 155 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 VWA2Q5GFL6 755 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 GARNL3Q5VVW2 1013 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 PRMT9Q6P2P2 845 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 KIRREL2Q6UWL6 708 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 ADCK2Q7Z695 626 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 THOC6Q86W42 341 aaKnown RBP12.97□□□□□ -0.33
PDCD11-206ENST00000493610 CTAGE4Q8IX94 777 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 CTAGE3PQ8IX95 158 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 CENPLQ8N0S6 344 aaPredicted RBP12.97□□□□□ -0.33
PDCD11-206ENST00000493610 ANKRD53Q8N9V6 530 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 MFSD9Q8NBP5 474 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 FDCSPQ8NFU4 85 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 STT3BQ8TCJ2 826 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 CABS1Q96KC9 395 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 HIST1H2AHQ96KK5 128 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 HIST1H2AJQ99878 128 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 HAUS8Q9BT25 410 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 H2AFJQ9BTM1 129 aa12.97□□□□□ -0.33
PDCD11-206ENST00000493610 ACSS3Q9H6R3 686 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms