RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CDKL4Q5MAI5 379 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 ZNF425Q6IV72 752 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 BORAQ6PGQ7 559 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 RNF44Q7L0R7 432 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 TMPRSS11BQ86T26 416 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 BPHLQ86WA6 291 aaPredicted RBP11.1□□□□□ -0.63
CTSA-209ENST00000493522 PAQR7Q86WK9 346 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 GPR135Q8IZ08 494 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 DNAJC22Q8N4W6 341 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 SNX31Q8N9S9 440 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 RHEBL1Q8TAI7 183 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 ACMSDQ8TDX5 336 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 ZUFSPQ96AP4 578 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 GPR78Q96P69 363 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 OR4K3Q96R72 315 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 SELENOSQ9BQE4 189 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 PLCD4Q9BRC7 762 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 SLC7A5P2Q9GIP4 190 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 ADNPQ9H2P0 1102 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 EURLQ9NYK6 297 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 SNX7Q9UNH6 387 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 SLC22A14Q9Y267 594 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 KLK4Q9Y5K2 254 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 LRRK2Q5S007 2527 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 NUP210LQ5VU65 1888 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 A0A1W2PPM1 405 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 E7EQ34 232 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 H7BY64 318 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 HAT1O14929 419 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 TAPBPO15533 448 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 CCNT2O60583 730 aaKnown RBP11.09□□□□□ -0.63
CTSA-209ENST00000493522 RAD1O60671 282 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 CPNE3O75131 537 aaKnown RBP11.09□□□□□ -0.63
CTSA-209ENST00000493522 SMIM24O75264 130 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 MSL3P1P0C860 447 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 EZRP15311 586 aaKnown RBP11.09□□□□□ -0.63
CTSA-209ENST00000493522 WT1P19544 449 aaPredicted RBP11.09□□□□□ -0.63
CTSA-209ENST00000493522 HRH2P25021 359 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 GDF5P43026 501 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 KCNC1P48547 511 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 VSX2P58304 361 aaPredicted RBP11.09□□□□□ -0.63
CTSA-209ENST00000493522 TLE1Q04724 770 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 SRSF1Q07955 248 aaKnown RBP eCLIP11.09□□□□□ -0.63
CTSA-209ENST00000493522 CDC16Q13042 620 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 RASA2Q15283 850 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 KRT71Q3SY84 523 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 PWWP2BQ6NUJ5 590 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 LRRC70Q7Z2Q7 622 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 PLD3Q8IV08 490 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 MCATQ8IVS2 390 aaKnown RBP11.09□□□□□ -0.63
CTSA-209ENST00000493522 CYP4X1Q8N118 509 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 IL22RA1Q8N6P7 574 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 GALNT6Q8NCL4 622 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 UBTD2Q8WUN7 234 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 SLC5A11Q8WWX8 675 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 NEIL2Q969S2 332 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 ESAMQ96AP7 390 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 PRAP1Q96NZ9 151 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 FCRL4Q96PJ5 515 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 ZFYVE21Q9BQ24 234 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 MRPL57Q9BQC6 102 aaKnown RBP11.09□□□□□ -0.63
CTSA-209ENST00000493522 MRPL46Q9H2W6 279 aaKnown RBP11.09□□□□□ -0.63
CTSA-209ENST00000493522 ACTR5Q9H9F9 607 aaPredicted RBP11.09□□□□□ -0.63
CTSA-209ENST00000493522 TMEM184CQ9NVA4 438 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 DNAJC11Q9NVH1 559 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 SERTAD3Q9UJW9 196 aa11.09□□□□□ -0.63
CTSA-209ENST00000493522 ZSCAN9O15535 394 aaPredicted RBP11.08□□□□□ -0.64
CTSA-209ENST00000493522 GLRA3O75311 464 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 STK16O75716 305 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 DLGAP3O95886 979 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 NTRK1P04629 796 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 EIF2S1P05198 315 aaKnown RBP11.08□□□□□ -0.64
CTSA-209ENST00000493522 CTSBP07858 339 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 MTHFD2P13995 350 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 NPPBP16860 134 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 GRK3P35626 688 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 AGTR2P50052 363 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 CCR8P51685 355 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 CSNK1G2P78368 415 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 MEF2AQ02078 507 aaPredicted RBP11.08□□□□□ -0.64
CTSA-209ENST00000493522 ZNF844Q08AG5 666 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 SETDB1Q15047 1291 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 PDK4Q16654 411 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 PFKFB4Q16877 469 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 COLEC12Q5KU26 742 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 CATSPEREQ5SY80 951 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 PRAMEF17Q5VTA0 474 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 FRMPD2BQ6IN97 320 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 LCA5Q86VQ0 697 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 KLHDC8AQ8IYD2 350 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 C4orf33Q8N1A6 199 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 ZNF655Q8N720 491 aaPredicted RBP11.08□□□□□ -0.64
CTSA-209ENST00000493522 PTGR2Q8N8N7 351 aaPredicted RBP11.08□□□□□ -0.64
CTSA-209ENST00000493522 TTC29Q8NA56 475 aaPredicted RBP11.08□□□□□ -0.64
CTSA-209ENST00000493522 RERGQ96A58 199 aaPredicted RBP11.08□□□□□ -0.64
CTSA-209ENST00000493522 CLIP3Q96DZ5 547 aa11.08□□□□□ -0.64
CTSA-209ENST00000493522 ROPN1BQ9BZX4 212 aaPredicted RBP11.08□□□□□ -0.64
CTSA-209ENST00000493522 SPRTNQ9H040 489 aaPredicted RBP11.08□□□□□ -0.64
CTSA-209ENST00000493522 ROPN1Q9HAT0 212 aaPredicted RBP11.08□□□□□ -0.64
CTSA-209ENST00000493522 TMEM216Q9P0N5 145 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms