RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 DCDP81605 110 aaKnown RBP13.35□□□□□ -0.27
CCM2-217ENST00000492883 CDC16Q13042 620 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 RASA2Q15283 850 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 TECRLQ5HYJ1 363 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 CYP4X1Q8N118 509 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 OR4K1Q8NGD4 311 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 PROKR1Q8TCW9 393 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 CT55Q8WUE5 264 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 THAP11Q96EK4 314 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 DPH2Q9BQC3 489 aaPredicted RBP13.35□□□□□ -0.27
CCM2-217ENST00000492883 MRPL57Q9BQC6 102 aaKnown RBP13.35□□□□□ -0.27
CCM2-217ENST00000492883 AIF1LQ9BQI0 150 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 CHST8Q9H2A9 424 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 PELI2Q9HAT8 420 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 CPNE5Q9HCH3 593 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 CUTCQ9NTM9 273 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 GPRC5BQ9NZH0 403 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 XPR1Q9UBH6 696 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 KCND3Q9UK17 655 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 SSUH2Q9Y2M2 353 aa13.35□□□□□ -0.27
CCM2-217ENST00000492883 KCNE1BA0A087WTH5 132 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 TRBC2A0A5B9 178 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 FITM1A5D6W6 292 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 EFSO43281 561 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 LCMT2O60294 686 aaKnown RBP13.34□□□□□ -0.27
CCM2-217ENST00000492883 SMIM24O75264 130 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 STATHP02808 62 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 C1GALT1C1LP0DN25 315 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 CXCR2P25025 360 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 BCL6P41182 706 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 RPS15P62841 145 aaKnown RBP13.34□□□□□ -0.27
CCM2-217ENST00000492883 VAC14Q08AM6 782 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 DNASE1L3Q13609 305 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 RBBP5Q15291 538 aaKnown RBP13.34□□□□□ -0.27
CCM2-217ENST00000492883 PDK4Q16654 411 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 MUM1Q2TAK8 710 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 COL28A1Q2UY09 1125 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 ARHGAP40Q5TG30 622 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 LRRC70Q7Z2Q7 622 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 LCA5Q86VQ0 697 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 MREGQ8N565 214 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 MFSD9Q8NBP5 474 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 MZB1Q8WU39 189 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 ROPN1BQ9BZX4 212 aaPredicted RBP13.34□□□□□ -0.27
CCM2-217ENST00000492883 MRPL46Q9H2W6 279 aaKnown RBP13.34□□□□□ -0.27
CCM2-217ENST00000492883 ROPN1Q9HAT0 212 aaPredicted RBP13.34□□□□□ -0.27
CCM2-217ENST00000492883 OPTCQ9UBM4 332 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 DCDC2Q9UHG0 476 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 TMCO1Q9UM00 188 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 PLAAQ9Y263 795 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 RUVBL1Q9Y265 456 aaKnown RBP13.34□□□□□ -0.27
CCM2-217ENST00000492883 ANGPTL3Q9Y5C1 460 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 PCDHGA4Q9Y5G9 962 aa13.34□□□□□ -0.27
CCM2-217ENST00000492883 TNPO3Q9Y5L0 923 aaKnown RBP13.34□□□□□ -0.27
CCM2-217ENST00000492883 KIF26BQ2KJY2 2108 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 A0A1B0GX78 115 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 FOXO6A8MYZ6 492 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 C21orf140B9A014 251 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 C9J4A7 227 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 K7ENP7 123 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 K7EPI3 171 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 DSCR3O14972 297 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 KLK8O60259 260 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 ERLIN1O75477 346 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 SERPIND1P05546 499 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 PIM1P11309 404 aaPredicted RBP13.33□□□□□ -0.28
CCM2-217ENST00000492883 EPB42P16452 691 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 F8A1P23610 371 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 VARSP26640 1264 aaKnown RBP13.33□□□□□ -0.28
CCM2-217ENST00000492883 EMP3P54852 163 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 SETDB1Q15047 1291 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 NDUFA9Q16795 377 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 HKDC1Q2TB90 917 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 PRTGQ2VWP7 1150 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 XKR6Q5GH73 641 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 MLIPQ5VWP3 458 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 ATG9BQ674R7 924 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 LCN10Q6JVE6 187 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 C16orf46Q6P387 395 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 INO80CQ6PI98 192 aaPredicted RBP13.33□□□□□ -0.28
CCM2-217ENST00000492883 ZNF517Q6ZMY9 492 aaPredicted RBP13.33□□□□□ -0.28
CCM2-217ENST00000492883 SLCO4C1Q6ZQN7 724 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 ASPGQ86U10 573 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 RIBC1Q8N443 379 aaPredicted RBP13.33□□□□□ -0.28
CCM2-217ENST00000492883 TEX9Q8N6V9 391 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 PTGR2Q8N8N7 351 aaPredicted RBP13.33□□□□□ -0.28
CCM2-217ENST00000492883 CAMKVQ8NCB2 501 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 ZNF740Q8NDX6 193 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 UBTD2Q8WUN7 234 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 SLC13A3Q8WWT9 602 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 PHF21BQ96EK2 531 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 GBP5Q96PP8 586 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 C17orf62Q9BQA9 187 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 GPR87Q9BY21 358 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 SYNPO2LQ9H987 977 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 RRAGDQ9NQL2 400 aaPredicted RBP13.33□□□□□ -0.28
CCM2-217ENST00000492883 ENAMQ9NRM1 1142 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 TMEM216Q9P0N5 145 aa13.33□□□□□ -0.28
CCM2-217ENST00000492883 IFT80Q9P2H3 777 aaPredicted RBP13.33□□□□□ -0.28
CCM2-217ENST00000492883 IL17BQ9UHF5 180 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms