RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 MAMDC2Q7Z304 686 aaPredicted RBP11.83□□□□□ -0.52
COL6A1-205ENST00000492851 LAPTM4BQ86VI4 370 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 TMEM151BQ8IW70 566 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 LRRC56Q8IYG6 542 aaPredicted RBP11.83□□□□□ -0.52
COL6A1-205ENST00000492851 CPNE9Q8IYJ1 553 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 PRSS58Q8IYP2 241 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 MYO1HQ8N1T3 1032 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 BCORP1Q8N888 145 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 CAMKVQ8NCB2 501 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 C2CD4AQ8NCU7 369 aaPredicted RBP11.83□□□□□ -0.52
COL6A1-205ENST00000492851 PPFIBP2Q8ND30 876 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 GIMAP7Q8NHV1 300 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 SUN3Q8TAQ9 357 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 CD200R1Q8TD46 325 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 CNDP1Q96KN2 507 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 PRAP1Q96NZ9 151 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 OSBPL9Q96SU4 736 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 SLC30A3Q99726 388 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 TUBB6Q9BUF5 446 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 TRIM54Q9BYV2 358 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 IARS2Q9NSE4 1012 aaKnown RBP11.83□□□□□ -0.52
COL6A1-205ENST00000492851 C19orf25Q9UFG5 118 aaPredicted RBP11.83□□□□□ -0.52
COL6A1-205ENST00000492851 SEC16AO15027 2179 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 NBASA2RRP1 2371 aa11.83□□□□□ -0.52
COL6A1-205ENST00000492851 USP9YO00507 2555 aaPredicted RBP11.82□□□□□ -0.52
COL6A1-205ENST00000492851 MED13Q9UHV7 2174 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 IGHV1-45A0A0A0MS14 117 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 A0A0A6YYC8 382 aaPredicted RBP11.82□□□□□ -0.52
COL6A1-205ENST00000492851 I3L1I5 382 aaPredicted RBP11.82□□□□□ -0.52
COL6A1-205ENST00000492851 FOXS1O43638 330 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 NRP2O60462 931 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 ALOX12BO75342 701 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 KLHL18O94889 574 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 NSA2O95478 260 aaKnown RBP11.82□□□□□ -0.52
COL6A1-205ENST00000492851 LDLRP01130 860 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 C8orf89P0DMQ9 161 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 IMPA1P29218 277 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 SKP1P63208 163 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 RNASEH2BQ5TBB1 312 aaKnown RBP11.82□□□□□ -0.52
COL6A1-205ENST00000492851 NIPAL1Q6NVV3 410 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 TMEM205Q6UW68 189 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 GALNT7Q86SF2 657 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 C17orf64Q86WR6 236 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 TBC1D19Q8N5T2 526 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 AMER3Q8N944 861 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 OR1N1Q8NGS0 311 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 GRHL3Q8TE85 626 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 C8orf44Q96CB5 159 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 RUNDC3BQ96NL0 473 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 TRIM56Q9BRZ2 755 aaKnown RBP11.82□□□□□ -0.52
COL6A1-205ENST00000492851 HAUS8Q9BT25 410 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 RNF32Q9H0A6 362 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 ZNF700Q9H0M5 742 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 ABCF3Q9NUQ8 709 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 STOX2Q9P2F5 926 aaPredicted RBP11.82□□□□□ -0.52
COL6A1-205ENST00000492851 ERRFI1Q9UJM3 462 aaPredicted RBP11.82□□□□□ -0.52
COL6A1-205ENST00000492851 MKL2Q9ULH7 1088 aa11.82□□□□□ -0.52
COL6A1-205ENST00000492851 CORO1CQ9ULV4 474 aaPredicted RBP11.82□□□□□ -0.52
COL6A1-205ENST00000492851 A0A1B0GUH1 482 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 HAT1O14929 419 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 TCP1P17987 556 aaKnown RBP11.81□□□□□ -0.52
COL6A1-205ENST00000492851 SOX11P35716 441 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 TNFSF10P50591 281 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 AP1S2P56377 157 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 IL2P60568 153 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 TBPL1P62380 186 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 MPP1Q00013 466 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 CRYMQ14894 314 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 CAPN13Q6MZZ7 669 aaPredicted RBP11.81□□□□□ -0.52
COL6A1-205ENST00000492851 AGTRAPQ6RW13 159 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 SYDE1Q6ZW31 735 aaPredicted RBP11.81□□□□□ -0.52
COL6A1-205ENST00000492851 PIWIL4Q7Z3Z4 852 aaKnown RBP11.81□□□□□ -0.52
COL6A1-205ENST00000492851 CNTN4Q8IWV2 1026 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 PDIK1LQ8N165 341 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 ARHGEF39Q8N4T4 335 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 DTWD1Q8N5C7 304 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 EEF1AKMT1Q8WVE0 214 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 ATL1Q8WXF7 558 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 PSMF1Q92530 271 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 SLCO2A1Q92959 643 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 ANKHQ9HCJ1 492 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 OLAHQ9NV23 265 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 PTGFRNQ9P2B2 879 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 ASIC3Q9UHC3 531 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 SNX12Q9UMY4 172 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 PDE10AQ9Y233 779 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 NTNG1Q9Y2I2 539 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 SLC22A7Q9Y694 548 aa11.81□□□□□ -0.52
COL6A1-205ENST00000492851 PRRC2CQ9Y520 2896 aaKnown RBP11.81□□□□□ -0.52
COL6A1-205ENST00000492851 USP9XQ93008 2570 aaPredicted RBP11.8□□□□□ -0.52
COL6A1-205ENST00000492851 CDK2AP1O14519 115 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 DNALI1O14645 258 aaPredicted RBP11.8□□□□□ -0.52
COL6A1-205ENST00000492851 CRYABP02511 175 aaKnown RBP11.8□□□□□ -0.52
COL6A1-205ENST00000492851 AHSGP02765 367 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 SLC35G6P0C7Q6 338 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 BCL6P41182 706 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 AGTR2P50052 363 aa11.8□□□□□ -0.52
COL6A1-205ENST00000492851 EEF1A2Q05639 463 aaKnown RBP11.8□□□□□ -0.52
COL6A1-205ENST00000492851 DHX9Q08211 1270 aaKnown RBP11.8□□□□□ -0.52
COL6A1-205ENST00000492851 ILF2Q12905 390 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms