RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 ZNF669Q96BR6 464 aaPredicted RBP17.47■□□□□ 0.39
HDAC6-231ENST00000488905 RNF32Q9H0A6 362 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.47■□□□□ 0.39
HDAC6-231ENST00000488905 ZNF700Q9H0M5 742 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 ABCF3Q9NUQ8 709 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 ENTPD4Q9Y227 616 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 MED16Q9Y2X0 877 aa17.47■□□□□ 0.39
HDAC6-231ENST00000488905 PKDREJQ9NTG1 2253 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 OTOGQ6ZRI0 2925 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-231ENST00000488905 SYF2O95926 243 aaKnown RBP17.46■□□□□ 0.39
HDAC6-231ENST00000488905 F10P00742 488 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 F7P08709 466 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-231ENST00000488905 TNFRSF8P28908 595 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 MAT1AQ00266 395 aaKnown RBP17.46■□□□□ 0.39
HDAC6-231ENST00000488905 DHX34Q14147 1143 aaKnown RBP17.46■□□□□ 0.39
HDAC6-231ENST00000488905 FAM53BQ14153 422 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 ANKRD22Q5VYY1 191 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 TMEM205Q6UW68 189 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 CAND1Q86VP6 1230 aaKnown RBP17.46■□□□□ 0.39
HDAC6-231ENST00000488905 PLD3Q8IV08 490 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 KCNJ9Q92806 393 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 MARVELD3Q96A59 401 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 EBNA1BP2Q99848 306 aaKnown RBP17.46■□□□□ 0.39
HDAC6-231ENST00000488905 LZTFL1Q9NQ48 299 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 HOMER3Q9NSC5 361 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 KLHL42Q9P2K6 505 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 MKL2Q9ULH7 1088 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 AKAP9Q99996 3911 aa17.46■□□□□ 0.39
HDAC6-231ENST00000488905 FAM237BA0A1B0GVD1 139 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 CTAGE9A4FU28 777 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 HNRNPRO43390 633 aaKnown RBP17.45■□□□□ 0.38
HDAC6-231ENST00000488905 CEP104O60308 925 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 WDPCPO95876 746 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 MPC1LP0DKB6 136 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 C8orf89P0DMQ9 161 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 ENO3P13929 434 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-231ENST00000488905 IMPA1P29218 277 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 SKIV2L2P42285 1042 aaKnown RBP17.45■□□□□ 0.38
HDAC6-231ENST00000488905 AVPR1BP47901 424 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 SNRPNP63162 240 aaKnown RBP17.45■□□□□ 0.38
HDAC6-231ENST00000488905 GPS1Q13098 491 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 NDUFA9Q16795 377 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 THEMIS2Q5TEJ8 643 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 SPNS2Q8IVW8 549 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 DENND6AQ8IWF6 608 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 LRRC56Q8IYG6 542 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-231ENST00000488905 PRELID2Q8N945 189 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 ASB11Q8WXH4 323 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 RELTQ969Z4 430 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 TUBB6Q9BUF5 446 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 CCDC68Q9H2F9 335 aa17.45■□□□□ 0.38
HDAC6-231ENST00000488905 FBXO6Q9NRD1 293 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-231ENST00000488905 TEP1Q99973 2627 aaKnown RBP17.45■□□□□ 0.38
HDAC6-231ENST00000488905 ARHGAP10A1A4S6 786 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 PRSS44E7EML9 344 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 H0YIG0 161 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 GFYI3L273 518 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 ICAM2P13598 275 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 CXCR5P32302 372 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 SLC1A2P43004 574 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 THOC5Q13769 683 aaKnown RBP17.44■□□□□ 0.38
HDAC6-231ENST00000488905 ZNF549Q6P9A3 640 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 GFRALQ6UXV0 394 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 IMMP1LQ96LU5 166 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 VN1R1Q9GZP7 353 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 ABI3Q9P2A4 366 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 COPG2Q9UBF2 871 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 NCOA6Q14686 2063 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-231ENST00000488905 CACNA1CQ13936 2221 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 ADGRG4Q8IZF6 3080 aa17.44■□□□□ 0.38
HDAC6-231ENST00000488905 ZCWPW2A0A1B0GU75 182 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 OR5H15A6NDH6 313 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 H7BY64 318 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 ZBTB14O43829 449 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 RASAL1O95294 804 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 NSA2O95478 260 aaKnown RBP17.43■□□□□ 0.38
HDAC6-231ENST00000488905 CRYABP02511 175 aaKnown RBP17.43■□□□□ 0.38
HDAC6-231ENST00000488905 STATHP02808 62 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 CYC1P08574 325 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 MLNP12872 115 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 TBPL1P62380 186 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 ZNF33BQ06732 778 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 CTBP1Q13363 440 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 ABHD17BQ5VST6 288 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 ZNF662Q6ZS27 426 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 LANCL3Q6ZV70 420 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 UBE2R2Q712K3 238 aaPredicted RBP17.43■□□□□ 0.38
HDAC6-231ENST00000488905 PRSS41Q7RTY9 318 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 VN1R4Q7Z5H5 301 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 AMER2Q8N7J2 671 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 TRIM58Q8NG06 486 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 OR9A4Q8NGU2 314 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 SUN3Q8TAQ9 357 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 CD200R1Q8TD46 325 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 METTL21AQ8WXB1 218 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 PRAP1Q96NZ9 151 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 GPR21Q99679 349 aa17.43■□□□□ 0.38
HDAC6-231ENST00000488905 XAB2Q9HCS7 855 aaKnown RBP17.43■□□□□ 0.38
HDAC6-231ENST00000488905 CCDC177Q9NQR7 707 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms