RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 TMEM237Q96Q45 408 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 ZPBPQ9BS86 351 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 CNTNAP3Q9BZ76 1288 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 ACTR5Q9H9F9 607 aaPredicted RBP10.57□□□□□ -0.72
UBE4B-210ENST00000488228 PELI2Q9HAT8 420 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 TMEM184CQ9NVA4 438 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 WDR70Q9NW82 654 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 ARGLU1Q9NWB6 273 aaPredicted RBP10.57□□□□□ -0.72
UBE4B-210ENST00000488228 MKS1Q9NXB0 559 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 DCDC2Q9UHG0 476 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 KCNE2Q9Y6J6 123 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 ZZEF1O43149 2961 aa10.57□□□□□ -0.72
UBE4B-210ENST00000488228 DSPP15924 2871 aaKnown RBP10.56□□□□□ -0.72
UBE4B-210ENST00000488228 UQCRHLA0A096LP55 91 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 STMND1H3BQB6 276 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 STX16-NPEPL1H3BU86 382 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 E2F3O00716 465 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 STX16O14662 325 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 ZNF749O43361 778 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 DLX3O60479 287 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 PLIN3O60664 434 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 RAD1O60671 282 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 CPNE3O75131 537 aaKnown RBP10.56□□□□□ -0.72
UBE4B-210ENST00000488228 MED26O95402 600 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 UQCRHP07919 91 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 RPS17P08708 135 aaKnown RBP10.56□□□□□ -0.72
UBE4B-210ENST00000488228 GNAZP19086 355 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 CD22P20273 847 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 HRH2P25021 359 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 CD82P27701 267 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 RPS15AP62244 130 aaKnown RBP10.56□□□□□ -0.72
UBE4B-210ENST00000488228 CYP4F2P78329 520 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 NFKB2Q00653 900 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 GPS2Q13227 327 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 SRSF6Q13247 344 aaKnown RBP10.56□□□□□ -0.72
UBE4B-210ENST00000488228 GTF2H2Q13888 395 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 HKDC1Q2TB90 917 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 XKR6Q5GH73 641 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 WASHC2DQ5SRD0 308 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 C1orf189Q5VU69 101 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 FAM219BQ5XKK7 198 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 ATG9BQ674R7 924 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 ADNP2Q6IQ32 1131 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 GTF2H2CQ6P1K8 395 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 FBXO42Q6P3S6 717 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 TIPARPQ7Z3E1 657 aaKnown RBP10.56□□□□□ -0.72
UBE4B-210ENST00000488228 GOLGA7Q7Z5G4 137 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 VASH2Q86V25 355 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 PROSER1Q86XN7 944 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.56□□□□□ -0.72
UBE4B-210ENST00000488228 METTL27Q8N6F8 245 aaPredicted RBP10.56□□□□□ -0.72
UBE4B-210ENST00000488228 SLC38A9Q8NBW4 561 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 KCNE4Q8WWG9 221 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 FGF11Q92914 225 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 C10orf90Q96M02 699 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 ZNF285Q96NJ3 590 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 OR2A5Q96R48 311 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 SMC6Q96SB8 1091 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 RUFY1Q96T51 708 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 MACROD1Q9BQ69 325 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 B3GNT4Q9C0J1 378 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 IQCGQ9H095 443 aaKnown RBP10.56□□□□□ -0.72
UBE4B-210ENST00000488228 GEMIN8Q9NWZ8 242 aaKnown RBP10.56□□□□□ -0.72
UBE4B-210ENST00000488228 GPRC5BQ9NZH0 403 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 SLC17A7Q9P2U7 560 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 PCTPQ9UKL6 214 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 ACSL6Q9UKU0 697 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 TMCO1Q9UM00 188 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 RUVBL1Q9Y265 456 aaKnown RBP10.56□□□□□ -0.72
UBE4B-210ENST00000488228 TMEM184BQ9Y519 407 aaPredicted RBP10.56□□□□□ -0.72
UBE4B-210ENST00000488228 ANGPTL3Q9Y5C1 460 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 PCDHB3Q9Y5E6 796 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 PCDHGA4Q9Y5G9 962 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 ITPR1Q14643 2758 aa10.56□□□□□ -0.72
UBE4B-210ENST00000488228 TRBC2A0A5B9 178 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 TMEM8BA6NDV4 472 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 G3V2L1 256 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 TAF4O00268 1085 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 CLGNO14967 610 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 OR1F1O43749 312 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 LCMT2O60294 686 aaKnown RBP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 MYZAPP0CAP1 466 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 MYL2P10916 166 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 LIPCP11150 499 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 EPB42P16452 691 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 TSPAN8P19075 237 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 TAC1P20366 129 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 ATP5F1P24539 256 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 GRK3P35626 688 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 GCGRP47871 477 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 CCT5P48643 541 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 SNRPNP63162 240 aaKnown RBP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 CHIT1Q13231 466 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 CLN3Q13286 438 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 DOC2AQ14183 400 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 SLC9A5Q14940 896 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 PCBP2Q15366 365 aaKnown RBP eCLIP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 ZYG11AQ6WRX3 759 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms