RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 PMEPA1Q969W9 287 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 CLIP3Q96DZ5 547 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 THAP11Q96EK4 314 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 RNF31Q96EP0 1072 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 APOPT1Q96IL0 206 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 NDC1Q9BTX1 674 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 TXLNGQ9NUQ3 528 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 MID2Q9UJV3 735 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 SH2B3Q9UQQ2 575 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 FEZF1A0PJY2 475 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 H0YGG7 62 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 STX16-NPEPL1H3BU86 382 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 STX16O14662 325 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 ZSCAN9O15535 394 aaPredicted RBP15.06■□□□□ 0
C9orf3-219ENST00000488186 RRP8O43159 456 aaKnown RBP15.06■□□□□ 0
C9orf3-219ENST00000488186 ZNF749O43361 778 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 NRP2O60462 931 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 CPNE3O75131 537 aaKnown RBP15.06■□□□□ 0
C9orf3-219ENST00000488186 KATNA1O75449 491 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 KLK3P07288 261 aaPredicted RBP15.06■□□□□ 0
C9orf3-219ENST00000488186 ARF3P61204 181 aaPredicted RBP15.06■□□□□ 0
C9orf3-219ENST00000488186 GRM7Q14831 915 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 PCBP2Q15366 365 aaKnown RBP eCLIP15.06■□□□□ 0
C9orf3-219ENST00000488186 FAM214AQ32MH5 1076 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 ATG9BQ674R7 924 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 FRMPD2BQ6IN97 320 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 C6orf15Q6UXA7 325 aaPredicted RBP15.06■□□□□ 0
C9orf3-219ENST00000488186 RNF44Q7L0R7 432 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 GOLGA6L1Q8N7Z2 621 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 ZNF248Q8NDW4 579 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 CCDC126Q96EE4 140 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 PGM2Q96G03 612 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 NAF1Q96HR8 494 aaKnown RBP15.06■□□□□ 0
C9orf3-219ENST00000488186 ACTR5Q9H9F9 607 aaPredicted RBP15.06■□□□□ 0
C9orf3-219ENST00000488186 STARD5Q9NSY2 213 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 NDOR1Q9UHB4 597 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 PILRAQ9UKJ1 303 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 PCDHB3Q9Y5E6 796 aa15.06■□□□□ 0
C9orf3-219ENST00000488186 KMT2BQ9UMN6 2715 aaPredicted RBP15.06■□□□□ 0
C9orf3-219ENST00000488186 CACNA1BQ00975 2339 aa15.05■□□□□ 0
C9orf3-219ENST00000488186 ZZEF1O43149 2961 aa15.05■□□□□ 0
C9orf3-219ENST00000488186 A0A087WV48 116 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 LOC105369274A0A096LPK9 316 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 LOC102723532A0A0G2JNH3 316 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 TRBC2A0A5B9 178 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 A8MT66 165 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.05■□□□□ -0
C9orf3-219ENST00000488186 TAF4O00268 1085 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 HCRTR1O43613 425 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 PLIN3O60664 434 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 SIX3O95343 332 aaPredicted RBP15.05■□□□□ -0
C9orf3-219ENST00000488186 SERPIND1P05546 499 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 H2AFXP16104 143 aaPredicted RBP15.05■□□□□ -0
C9orf3-219ENST00000488186 ALAS2P22557 587 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 VARSP26640 1264 aaKnown RBP15.05■□□□□ -0
C9orf3-219ENST00000488186 GABRA4P48169 554 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 ATP1A2P50993 1020 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 ARSFP54793 590 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 CHIT1Q13231 466 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 LAPTM5Q13571 262 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 GTF2H2Q13888 395 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 PAGE2BQ5JRK9 111 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 GTF2H2CQ6P1K8 395 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 LRRC69Q6ZNQ3 347 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 MYLK4Q86YV6 388 aaPredicted RBP15.05■□□□□ -0
C9orf3-219ENST00000488186 NLGN4XQ8N0W4 816 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 OR4N4Q8N0Y3 316 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 IL22RA1Q8N6P7 574 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 CSNK1A1LQ8N752 337 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 BANPQ8N9N5 519 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 GALNT6Q8NCL4 622 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 NLGN4YQ8NFZ3 816 aaPredicted RBP15.05■□□□□ -0
C9orf3-219ENST00000488186 OR4K1Q8NGD4 311 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 RDH11Q8TC12 318 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 PTCD3Q96EY7 689 aaKnown RBP15.05■□□□□ -0
C9orf3-219ENST00000488186 KCNK9Q9NPC2 374 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 SRPK3Q9UPE1 567 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 PKD1L2Q7Z442 2459 aa15.05■□□□□ -0
C9orf3-219ENST00000488186 KCNE1BA0A087WTH5 132 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 UQCRHLA0A096LP55 91 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 LRRC14BA6NHZ5 514 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 DLX3O60479 287 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 RAD1O60671 282 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 SUPT7LO94864 414 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 TIAF1O95411 115 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 PROCP04070 461 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 UQCRHP07919 91 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 SBK3P0C264 359 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 LIPCP11150 499 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 CPA3P15088 417 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 ZNF28P17035 718 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 AGXTP21549 392 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 CCNG1P51959 295 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 DOC2AQ14183 400 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 SLBPQ14493 270 aaKnown RBP eCLIP15.04■□□□□ -0
C9orf3-219ENST00000488186 RBBP7Q16576 425 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 PRAMEF17Q5VTA0 474 aa15.04■□□□□ -0
C9orf3-219ENST00000488186 YOD1Q5VVQ6 348 aaPredicted RBP15.04■□□□□ -0
C9orf3-219ENST00000488186 SLCO4C1Q6ZQN7 724 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms