RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ARF5P84085 180 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 EIF3IQ13347 325 aaKnown RBP3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 KRT81Q14533 505 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 EXOC3L4Q17RC7 722 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 DEFB133Q30KQ1 61 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 MYLK3Q32MK0 819 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 MINDY4Q4G0A6 757 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 PTPN20Q4JDL3 420 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 ZNF805Q5CZA5 627 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 TPRG1LQ5T0D9 272 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 ACSM6Q6P461 480 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 GJB7Q6PEY0 223 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 CRTC1Q6UUV9 634 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 KIAA0408Q6ZU52 694 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 ARCQ7LC44 396 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 BNIPLQ7Z465 357 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 SLC47A2Q86VL8 602 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 SLC35F3Q8IY50 421 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 FAM71AQ8IYT1 594 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 TMEM35BQ8NCS4 154 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 OR6C4Q8NGE1 309 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 LMX1AQ8TE12 382 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 C18orf8Q96DM3 657 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 CCNL2Q96S94 520 aaPredicted RBP3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 SEMA3CQ99985 751 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 ELOVL1Q9BW60 279 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 ZYG11BQ9C0D3 744 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 CDCP1Q9H5V8 836 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 SYNCQ9H7C4 482 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 MAP6D1Q9H9H5 199 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 OR12D3Q9UGF7 316 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 B3GNT3Q9Y2A9 372 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 FLNCQ14315 2725 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 LRRK2Q5S007 2527 aa3.95□□□□□ -1.78
SNRNP40-205ENST00000486941 ZFC3H1O60293 1989 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 SPTBN1Q01082 2364 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 ZSCAN5CA6NGD5 496 aaPredicted RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 NVLO15381 856 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 DHHO43323 396 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 KDELR3O43731 214 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 TM7SF2O76062 418 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 LSM8O95777 96 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 UGT2B4P06133 528 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 ENO1P06733 434 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 ACAA1P09110 424 aaPredicted RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 ALPIP09923 528 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 SFTPCP11686 197 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 TSHRP16473 764 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 SLC5A2P31639 672 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 UGT1A5P35504 534 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 PEX5P50542 639 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 SUOXP51687 545 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 PDX1P52945 283 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 PPARDQ03181 441 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 RAD51Q06609 339 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 C1orf61Q13536 156 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 SEMA5AQ13591 1074 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 NFATC4Q14934 902 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 ELOCQ15369 112 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 ZSCAN23Q3MJ62 389 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 LINC00303Q3SY05 128 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 TMEM52BQ4KMG9 183 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 C6orf10Q5SRN2 563 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 FAXCQ5TGI0 409 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 LIPMQ5VYY2 423 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 NXNQ6DKJ4 435 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 CAPRIN2Q6IMN6 1127 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 C16orf89Q6UX73 402 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 GDPD4Q6W3E5 623 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 MACC1Q6ZN28 852 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 RNF44Q7L0R7 432 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 RAB11FIP2Q7L804 512 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 NLRP14Q86W24 1093 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 GKN2Q86XP6 184 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 CREBRFQ8IUR6 639 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 UEVLDQ8IX04 471 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 RBFAQ8N0V3 343 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 RYBPQ8N488 228 aaPredicted RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 FBXO39Q8N4B4 442 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 ARL10Q8N8L6 244 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 MSANTD4Q8NCY6 345 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 OR2AP1Q8NGE2 309 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 HCAR2Q8TDS4 363 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 ZFPM2Q8WW38 1151 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 KAT2AQ92830 837 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 ARHGEF2Q92974 986 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 TMEM159Q96B96 161 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 SGF29Q96ES7 293 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 GPR78Q96P69 363 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 GFM1Q96RP9 751 aaKnown RBP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 ZNF347Q96SE7 839 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 TBCBQ99426 244 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 CCDC3Q9BQI4 270 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 LRRC61Q9BV99 259 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 EDEM3Q9BZQ6 932 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 TM6SF2Q9BZW4 377 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 B3GNT4Q9C0J1 378 aa3.94□□□□□ -1.78
SNRNP40-205ENST00000486941 STRADBQ9C0K7 418 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms