RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 SELENOSQ9BQE4 189 aa19.07■□□□□ 0.64
COL6A2-208ENST00000485591 AIF1LQ9BQI0 150 aa19.07■□□□□ 0.64
COL6A2-208ENST00000485591 SERTAD3Q9UJW9 196 aa19.07■□□□□ 0.64
COL6A2-208ENST00000485591 B3GALT1Q9Y5Z6 326 aa19.07■□□□□ 0.64
COL6A2-208ENST00000485591 KCNE1BA0A087WTH5 132 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 TRBC2A0A5B9 178 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 TM9SF1O15321 606 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 OR2B3O76000 313 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 CXCR2P25025 360 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 VARSP26640 1264 aaKnown RBP19.06■□□□□ 0.64
COL6A2-208ENST00000485591 CASP2P42575 452 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 ETV4P43268 484 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 DNAJB13P59910 316 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 ERVPABLB-1P60509 514 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 MAGOHP61326 146 aaKnown RBP19.06■□□□□ 0.64
COL6A2-208ENST00000485591 MEF2AQ02078 507 aaPredicted RBP19.06■□□□□ 0.64
COL6A2-208ENST00000485591 CYP4F3Q08477 520 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 XKR6Q5GH73 641 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 TCTE1Q5JU00 501 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 PLD3Q8IV08 490 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 GPR135Q8IZ08 494 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 TBC1D19Q8N5T2 526 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 GATA6Q92908 595 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 ARL8AQ96BM9 186 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 PTCD3Q96EY7 689 aaKnown RBP19.06■□□□□ 0.64
COL6A2-208ENST00000485591 EFCAB11Q9BUY7 163 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 TMEM121BQ9BXQ6 578 aaPredicted RBP19.06■□□□□ 0.64
COL6A2-208ENST00000485591 PITHD1Q9GZP4 211 aaPredicted RBP19.06■□□□□ 0.64
COL6A2-208ENST00000485591 SPNS1Q9H2V7 528 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 ACBD3Q9H3P7 528 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 IPPKQ9H8X2 491 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 SYNPO2LQ9H987 977 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 THSD1Q9NS62 852 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 OXSMQ9NWU1 459 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 GEMIN8Q9NWZ8 242 aaKnown RBP19.06■□□□□ 0.64
COL6A2-208ENST00000485591 FOXJ2Q9P0K8 574 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 PCDHGA4Q9Y5G9 962 aa19.06■□□□□ 0.64
COL6A2-208ENST00000485591 SDK2Q58EX2 2172 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 LOC105369274A0A096LPK9 316 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 LOC102723532A0A0G2JNH3 316 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 FEZF1A0PJY2 475 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 H2AFYO75367 372 aaKnown RBP19.05■□□□□ 0.64
COL6A2-208ENST00000485591 WFS1O76024 890 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 ZWINTO95229 277 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 TIAF1O95411 115 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 SLC5A2P31639 672 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 BCL6P41182 706 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 IRF8Q02556 426 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 CHIT1Q13231 466 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 DOC2AQ14183 400 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 SLBPQ14493 270 aaKnown RBP eCLIP19.05■□□□□ 0.64
COL6A2-208ENST00000485591 UNC50Q53HI1 259 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 PWWP2BQ6NUJ5 590 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 OR4N4Q8N0Y3 316 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 GOLGA6L1Q8N7Z2 621 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 ZNF740Q8NDX6 193 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 ATP6V1G3Q96LB4 118 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 ZNF578Q96N58 590 aaPredicted RBP19.05■□□□□ 0.64
COL6A2-208ENST00000485591 NSUN5Q96P11 429 aaKnown RBP19.05■□□□□ 0.64
COL6A2-208ENST00000485591 ZBTB26Q9HCK0 441 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 ACSL6Q9UKU0 697 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 PCDHB3Q9Y5E6 796 aa19.05■□□□□ 0.64
COL6A2-208ENST00000485591 H0YGG7 62 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 OR7A17O14581 309 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 ZSCAN9O15535 394 aaPredicted RBP19.04■□□□□ 0.64
COL6A2-208ENST00000485591 UGDHO60701 494 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 SCRG1O75711 98 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 SUPT7LO94864 414 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 CTSBP07858 339 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 CD22P20273 847 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 CD82P27701 267 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 SCTRP47872 440 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 VSX2P58304 361 aaPredicted RBP19.04■□□□□ 0.64
COL6A2-208ENST00000485591 ARF3P61204 181 aaPredicted RBP19.04■□□□□ 0.64
COL6A2-208ENST00000485591 NAA20P61599 178 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 LAPTM5Q13571 262 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 TBC1D25Q3MII6 688 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 TTMPQ5BVD1 217 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 PAGE2BQ5JRK9 111 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 LIPMQ5VYY2 423 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 TLDC1Q6P9B6 456 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 TMEM126BQ8IUX1 230 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 KRT78Q8N1N4 520 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 MFSD9Q8NBP5 474 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 PPP4R1Q8TF05 950 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 RERGQ96A58 199 aaPredicted RBP19.04■□□□□ 0.64
COL6A2-208ENST00000485591 SPRTNQ9H040 489 aaPredicted RBP19.04■□□□□ 0.64
COL6A2-208ENST00000485591 NT5DC2Q9H857 520 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 NOL11Q9H8H0 719 aaKnown RBP19.04■□□□□ 0.64
COL6A2-208ENST00000485591 ACTR8Q9H981 624 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 KCNK9Q9NPC2 374 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 SEMA4BQ9NPR2 832 aaPredicted RBP19.04■□□□□ 0.64
COL6A2-208ENST00000485591 DKK4Q9UBT3 224 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 AP1M2Q9Y6Q5 423 aa19.04■□□□□ 0.64
COL6A2-208ENST00000485591 SPTBP11277 2137 aa19.03■□□□□ 0.64
COL6A2-208ENST00000485591 FITM1A5D6W6 292 aa19.03■□□□□ 0.64
COL6A2-208ENST00000485591 OR1F1O43749 312 aa19.03■□□□□ 0.64
COL6A2-208ENST00000485591 LCMT2O60294 686 aaKnown RBP19.03■□□□□ 0.64
COL6A2-208ENST00000485591 AHRP35869 848 aa19.03■□□□□ 0.64
COL6A2-208ENST00000485591 SLC18A1P54219 525 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms