RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ZDHHC2Q9UIJ5 367 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.86■□□□□ 0.29
CHMP3-207ENST00000485465 RAP2CQ9Y3L5 183 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 PCM1Q15154 2024 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 FAM186AA6NE01 2351 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 GVINP1Q7Z2Y8 2422 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 TRBC2A0A5B9 178 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 FEZF1A0PJY2 475 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 MAP3K7O43318 606 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 CTSVO60911 334 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 FGF4P08620 206 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 EZRP15311 586 aaKnown RBP16.85■□□□□ 0.29
CHMP3-207ENST00000485465 ARL4DP49703 201 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 SEPHS1P49903 392 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 PDX1P52945 283 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 HSD11B2P80365 405 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 TRA2AQ13595 282 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHMP3-207ENST00000485465 CPSF6Q16630 551 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHMP3-207ENST00000485465 PHF19Q5T6S3 580 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 MED27Q6P2C8 311 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 B3GNT8Q7Z7M8 397 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 PLD3Q8IV08 490 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 TBC1D19Q8N5T2 526 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 CDYL2Q8N8U2 506 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 UBE2E3Q969T4 207 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 FAM122AQ96E09 287 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 PRR11Q96HE9 360 aaPredicted RBP16.85■□□□□ 0.29
CHMP3-207ENST00000485465 TMEM74Q96NL1 305 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 RTKNQ9BST9 563 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 SARGQ9BW04 601 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 SLC29A3Q9BZD2 475 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 FAM60AQ9NP50 221 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 PDE7BQ9NP56 450 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 SOHLH2Q9NX45 425 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 HAO1Q9UJM8 370 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 PILRAQ9UKJ1 303 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 ZNF490Q9ULM2 529 aaPredicted RBP16.85■□□□□ 0.29
CHMP3-207ENST00000485465 BTRCQ9Y297 605 aa16.85■□□□□ 0.29
CHMP3-207ENST00000485465 TCP11X1B4DZS4 312 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 H0YIV9 168 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 AZIN1O14977 448 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 OR1F1O43749 312 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 LCMT2O60294 686 aaKnown RBP16.84■□□□□ 0.29
CHMP3-207ENST00000485465 CRCPO75575 148 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 KCNK5O95279 499 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 MT-CO3P00414 261 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 CAPN1P07384 714 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 NELFEP18615 380 aaKnown RBP16.84■□□□□ 0.29
CHMP3-207ENST00000485465 BCL6P41182 706 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 MLLT3P42568 568 aaPredicted RBP16.84■□□□□ 0.29
CHMP3-207ENST00000485465 SCTRP47872 440 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 INHBCP55103 352 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 FOXA1P55317 472 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 RPS15AP62244 130 aaKnown RBP16.84■□□□□ 0.29
CHMP3-207ENST00000485465 RBBP5Q15291 538 aaKnown RBP16.84■□□□□ 0.29
CHMP3-207ENST00000485465 ZRSR2Q15696 482 aaKnown RBP16.84■□□□□ 0.29
CHMP3-207ENST00000485465 SH2D4BQ5SQS7 431 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 TMIGD1Q6UXZ0 262 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 RNF44Q7L0R7 432 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 ALYREFQ86V81 257 aaKnown RBP16.84■□□□□ 0.29
CHMP3-207ENST00000485465 LAS2Q8IYD9 372 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 CLYBLQ8N0X4 340 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 D2HGDHQ8N465 521 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 DNAJC22Q8N4W6 341 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 ZNF781Q8N8C0 355 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 RCBTB1Q8NDN9 531 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 METTL6Q8TCB7 284 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 C7orf26Q96N11 449 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 KCNA7Q96RP8 456 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 ZFYVE21Q9BQ24 234 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 SLCO1B3Q9NPD5 702 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 TRAF6Q9Y4K3 522 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 TIMM22Q9Y584 194 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 PCDHGA11Q9Y5H2 935 aa16.84■□□□□ 0.29
CHMP3-207ENST00000485465 FFAR3O14843 346 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 HGSO14964 777 aaPredicted RBP16.83■□□□□ 0.28
CHMP3-207ENST00000485465 GPR42O15529 346 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 UROSP10746 265 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 HMOX2P30519 316 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 CCKBRP32239 447 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 CYP4F3Q08477 520 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 ZC3H12BQ5HYM0 836 aaKnown RBP16.83■□□□□ 0.28
CHMP3-207ENST00000485465 TMTC4Q5T4D3 741 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 FAM219BQ5XKK7 198 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 CLEC6AQ6EIG7 209 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 MFSD9Q8NBP5 474 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 OR7G3Q8NG95 312 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 AGR3Q8TD06 166 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 REPS1Q96D71 796 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 THAP11Q96EK4 314 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 FCRL4Q96PJ5 515 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 PNPOQ9NVS9 261 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 SNX6Q9UNH7 406 aa16.83■□□□□ 0.28
CHMP3-207ENST00000485465 A0A0J9YVX5 310 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 TMEM233B4DJY2 109 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 TMX2-CTNND1H3BSU7 103 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 MANBAO00462 879 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 KRT6AP02538 564 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 KRT6BP04259 564 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 PCNAP12004 261 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms