RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 IMPA1P29218 277 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 SLC1A2P43004 574 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 AVPR1BP47901 424 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 UBE2R2Q712K3 238 aaPredicted RBP10.87□□□□□ -0.67
SCFD1-206ENST00000484733 SLC34A3Q8N130 599 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 OR1N1Q8NGS0 311 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 BRIX1Q8TDN6 353 aaKnown RBP10.87□□□□□ -0.67
SCFD1-206ENST00000484733 IMMP1LQ96LU5 166 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 CCDC138Q96M89 665 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 GPR21Q99679 349 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 FAM167BQ9BTA0 163 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 TUBB6Q9BUF5 446 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 YIPF2Q9BWQ6 316 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 FBXO5Q9UKT4 447 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 CPAMD8Q8IZJ3 1885 aa10.87□□□□□ -0.67
SCFD1-206ENST00000484733 A0A0A6YYC8 382 aaPredicted RBP10.86□□□□□ -0.67
SCFD1-206ENST00000484733 I3L1I5 382 aaPredicted RBP10.86□□□□□ -0.67
SCFD1-206ENST00000484733 SLC16A5O15375 505 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 P2RX6O15547 441 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 NSA2O95478 260 aaKnown RBP10.86□□□□□ -0.67
SCFD1-206ENST00000484733 TNFSF10P50591 281 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 TERF1P54274 439 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 RPS15AP62244 130 aaKnown RBP10.86□□□□□ -0.67
SCFD1-206ENST00000484733 ARG2P78540 354 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 EEF1A2Q05639 463 aaKnown RBP10.86□□□□□ -0.67
SCFD1-206ENST00000484733 TSTA3Q13630 321 aaPredicted RBP10.86□□□□□ -0.67
SCFD1-206ENST00000484733 UGT3A1Q6NUS8 523 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 PCGF5Q86SE9 256 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 AGGF1Q8N302 714 aaeCLIP10.86□□□□□ -0.67
SCFD1-206ENST00000484733 FAM129AQ9BZQ8 928 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 C20orf96Q9NUD7 363 aaPredicted RBP10.86□□□□□ -0.67
SCFD1-206ENST00000484733 A0A1B0GUH1 482 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 HAUS5O94927 633 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 SYF2O95926 243 aaKnown RBP10.86□□□□□ -0.67
SCFD1-206ENST00000484733 C8GP07360 202 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 TDGF1P3P51864 188 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 SP140Q13342 867 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 CUL1Q13616 776 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 PTK6Q13882 451 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 ZNF787Q6DD87 383 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 CCDC137Q6PK04 289 aaKnown RBP10.86□□□□□ -0.67
SCFD1-206ENST00000484733 C2CD4AQ8NCU7 369 aaPredicted RBP10.86□□□□□ -0.67
SCFD1-206ENST00000484733 DNAJB8Q8NHS0 232 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 GRK7Q8WTQ7 553 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 RELTQ969Z4 430 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 TM4SF19Q96DZ7 209 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 CCDC177Q9NQR7 707 aaPredicted RBP10.86□□□□□ -0.67
SCFD1-206ENST00000484733 OLAHQ9NV23 265 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 PTGFRNQ9P2B2 879 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 OSGIN2Q9Y236 505 aa10.86□□□□□ -0.67
SCFD1-206ENST00000484733 H7BY64 318 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 LRRTM2O43300 516 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 TIAL1Q01085 375 aaKnown RBP eCLIP10.85□□□□□ -0.672e-6■■■□□ 18.2
SCFD1-206ENST00000484733 KCTD19Q17RG1 926 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-206ENST00000484733 THEMIS2Q5TEJ8 643 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 VN1R4Q7Z5H5 301 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 ADCK2Q7Z695 626 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 PPIL6Q8IXY8 311 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 CPNE9Q8IYJ1 553 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.85□□□□□ -0.67
SCFD1-206ENST00000484733 GABPB2Q8TAK5 448 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-206ENST00000484733 MCOLN3Q8TDD5 553 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 PRAP1Q96NZ9 151 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 GOLGA8MH3BSY2 632 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 FFAR3O14843 346 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 GPR42O15529 346 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 NRDCO43847 1150 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 JRKO75564 520 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 MYBL2P10244 700 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 ITGAMP11215 1152 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 CCND1P24385 295 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 COL8A1P27658 744 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 FNTAP49354 379 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 EFNA3P52797 238 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 CSNK1G2P78368 415 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 ZRSR2Q15696 482 aaKnown RBP10.85□□□□□ -0.67
SCFD1-206ENST00000484733 SYT16Q17RD7 645 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 TMEM214Q6NUQ4 689 aaKnown RBP10.85□□□□□ -0.67
SCFD1-206ENST00000484733 H3F3CQ6NXT2 135 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 PIWIL4Q7Z3Z4 852 aaKnown RBP10.85□□□□□ -0.67
SCFD1-206ENST00000484733 GALNT7Q86SF2 657 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 TICAM1Q8IUC6 712 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 CAMKVQ8NCB2 501 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 ACTRT1Q8TDG2 376 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 METTL21AQ8WXB1 218 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 MS4A14Q96JA4 679 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 CYTH2Q99418 400 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 PLA2G3Q9NZ20 509 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 ABI3Q9P2A4 366 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 C19orf25Q9UFG5 118 aaPredicted RBP10.85□□□□□ -0.67
SCFD1-206ENST00000484733 TRMT6Q9UJA5 497 aaKnown RBP10.85□□□□□ -0.67
SCFD1-206ENST00000484733 MKL2Q9ULH7 1088 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 PDE10AQ9Y233 779 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 MAD1L1Q9Y6D9 718 aa10.85□□□□□ -0.67
SCFD1-206ENST00000484733 SPTAN1Q13813 2472 aaKnown RBP10.85□□□□□ -0.67
SCFD1-206ENST00000484733 SPTBN1Q01082 2364 aaKnown RBP10.84□□□□□ -0.67
SCFD1-206ENST00000484733 UTP20O75691 2785 aaKnown RBP10.84□□□□□ -0.67
SCFD1-206ENST00000484733 PGRMC1O00264 195 aaKnown RBP10.84□□□□□ -0.67
SCFD1-206ENST00000484733 CES2O00748 559 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 C8orf89P0DMQ9 161 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms