RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 C1QTNF3Q9BXJ4 246 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 DPH1Q9BZG8 443 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 PITHD1Q9GZP4 211 aaPredicted RBP18.88■□□□□ 0.61
LIME1-205ENST00000480139 SPRTNQ9H040 489 aaPredicted RBP18.88■□□□□ 0.61
LIME1-205ENST00000480139 ACTR5Q9H9F9 607 aaPredicted RBP18.88■□□□□ 0.61
LIME1-205ENST00000480139 COPG2Q9UBF2 871 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 SRPK3Q9UPE1 567 aa18.88■□□□□ 0.61
LIME1-205ENST00000480139 LOC105369274A0A096LPK9 316 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 LOC102723532A0A0G2JNH3 316 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 A8MT66 165 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 H0YGG7 62 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 E2F3O00716 465 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 TXNDC9O14530 226 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 ZNF749O43361 778 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 KATNA1O75449 491 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 CTSBP07858 339 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 C1GALT1C1LP0DN25 315 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 EPB42P16452 691 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 CXCR2P25025 360 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 EIF2S3P41091 472 aaKnown RBP18.87■□□□□ 0.61
LIME1-205ENST00000480139 CASP2P42575 452 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 VSX2P58304 361 aaPredicted RBP18.87■□□□□ 0.61
LIME1-205ENST00000480139 ARF3P61204 181 aaPredicted RBP18.87■□□□□ 0.61
LIME1-205ENST00000480139 CASP8Q14790 479 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 GRM7Q14831 915 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 TBCCQ15814 346 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 NLGN4XQ8N0W4 816 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 OR4N4Q8N0Y3 316 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 ESX1Q8N693 406 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 NLGN4YQ8NFZ3 816 aaPredicted RBP18.87■□□□□ 0.61
LIME1-205ENST00000480139 RDH11Q8TC12 318 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 AIF1LQ9BQI0 150 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 SYNPO2LQ9H987 977 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 PCDHGA4Q9Y5G9 962 aa18.87■□□□□ 0.61
LIME1-205ENST00000480139 PLIN3O60664 434 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 RAD1O60671 282 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 PROCP04070 461 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 RPS17P08708 135 aaKnown RBP18.86■□□□□ 0.61
LIME1-205ENST00000480139 ATP5F1P24539 256 aaPredicted RBP18.86■□□□□ 0.61
LIME1-205ENST00000480139 RORAP35398 523 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 BCL6P41182 706 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 ARSFP54793 590 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 PRTGQ2VWP7 1150 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 WASHC2DQ5SRD0 308 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 RHBDD2Q6NTF9 364 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 C6orf15Q6UXA7 325 aaPredicted RBP18.86■□□□□ 0.61
LIME1-205ENST00000480139 TIPARPQ7Z3E1 657 aaKnown RBP18.86■□□□□ 0.61
LIME1-205ENST00000480139 PLD3Q8IV08 490 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 SLC22A9Q8IVM8 553 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 TTC29Q8NA56 475 aaPredicted RBP18.86■□□□□ 0.61
LIME1-205ENST00000480139 MFSD9Q8NBP5 474 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 KCNE4Q8WWG9 221 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 CCDC126Q96EE4 140 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 PHF21BQ96EK2 531 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 PTCD3Q96EY7 689 aaKnown RBP18.86■□□□□ 0.61
LIME1-205ENST00000480139 SMC6Q96SB8 1091 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 NDC1Q9BTX1 674 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 EFCAB11Q9BUY7 163 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 NT5DC2Q9H857 520 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 IRAK4Q9NWZ3 460 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 ACACAQ13085 2346 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 AHCTF1Q8WYP5 2266 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 SPTBP11277 2137 aa18.86■□□□□ 0.61
LIME1-205ENST00000480139 FEZF1A0PJY2 475 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 DLX3O60479 287 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 H2AFYO75367 372 aaKnown RBP18.85■□□□□ 0.61
LIME1-205ENST00000480139 SIX3O95343 332 aaPredicted RBP18.85■□□□□ 0.61
LIME1-205ENST00000480139 NTRK1P04629 796 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 GSTM2P28161 218 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 EEF1DP29692 281 aaKnown RBP18.85■□□□□ 0.61
LIME1-205ENST00000480139 AHRP35869 848 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 SCTRP47872 440 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 ATP1A2P50993 1020 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 CLN3Q13286 438 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 LAPTM5Q13571 262 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 GTF2H2Q13888 395 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 FAM214AQ32MH5 1076 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 MANEAQ5SRI9 462 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 PRAMEF17Q5VTA0 474 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 GTF2H2CQ6P1K8 395 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 ZYG11AQ6WRX3 759 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 ZNF517Q6ZMY9 492 aaPredicted RBP18.85■□□□□ 0.61
LIME1-205ENST00000480139 VN1R4Q7Z5H5 301 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 TEX9Q8N6V9 391 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 ZNF655Q8N720 491 aaPredicted RBP18.85■□□□□ 0.61
LIME1-205ENST00000480139 CSNK1A1LQ8N752 337 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 SLC38A9Q8NBW4 561 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 GALNT6Q8NCL4 622 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 PROKR1Q8TCW9 393 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 NKD1Q969G9 470 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 TM4SF19Q96DZ7 209 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 SEC16BQ96JE7 1060 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 DPH2Q9BQC3 489 aaPredicted RBP18.85■□□□□ 0.61
LIME1-205ENST00000480139 IQCGQ9H095 443 aaKnown RBP18.85■□□□□ 0.61
LIME1-205ENST00000480139 STMN4Q9H169 189 aaPredicted RBP18.85■□□□□ 0.61
LIME1-205ENST00000480139 SPNS1Q9H2V7 528 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 SSU72Q9NP77 194 aaKnown RBP18.85■□□□□ 0.61
LIME1-205ENST00000480139 GEMIN8Q9NWZ8 242 aaKnown RBP18.85■□□□□ 0.61
LIME1-205ENST00000480139 MID2Q9UJV3 735 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 PCTPQ9UKL6 214 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms